Projecten per jaar
Persoonlijk profiel
Research profile
Shauna O’Donovan is an assistant professor in the Department of Biomedical Engineering (research group Computational Biology), working on systems biology for the immune-gut axis. She uses computational approaches to investigate how factors such as the gut microbiome and chronic inflammation contribute to the development of Type 2 Diabetes and cardiovascular disease. She is particularly interested in developing and deploying hybrid-approaches, combining the favorable features of machine learning techniques and mechanistic mathematical models to generate models that can not only integrate different data types but can also be trained with less data. In this way, she aims to construct a holistic in silico model of metabolic health, shedding light on how differences in gut health and chronic low-grade inflammation influence the development of cardiometabolic diseases and aiding in the design of personalised treatment programs for cardiometabolic diseases.
Academic background
Shauna O’Donovan received a B.SC in Mathematical Science (2013) and a M.Sc in Bioinformatics and Computational Biology (2015) from University College Cork, Ireland. She then went on to pursue a PhD in systems biology at Maastricht University under the supervision of Prof. Theo de Kok developing computational approaches to understand dynamic behaviors of biological systems from time series of omics measurements. She obtained her PhD in 2020. She then joined the Division of Human Nutrition and Health at Wageningen University as a postdoc. In 2022 she was appointed assistant professor at the Computational Biology group at the Department of Biomedical Engineering (TU/e, the Netherlands) working on systems biology for the immune-gut axis.
Expertise gerelateerd aan duurzame ontwikkelingsdoelstellingen van de VN
In 2015 stemden de VN-lidstaten in met 17 wereldwijde duurzame ontwikkelingsdoelstellingen (Sustainable Development Goals, SDG's) om armoede te beëindigen, de planeet te beschermen en voor iedereen welvaart te garanderen. Het werk van deze persoon draagt bij aan de volgende duurzame ontwikkelingsdoelstelling(en):
Opleiding / Academische kwalificatie
Bioinformatics/biostatistics, biomathematics, biomechanics, Doctor, Modelling the dynamics in time series of metabolic and transcriptomic data; Insulin resistance and liver toxicity. , Maastricht University
Datum van toekenning: 28 sep. 2020
Bioinformatics/biostatistics, biomathematics, biomechanics, Master, Bioinformatics and Computational Biology, University College Cork
Datum van toekenning: 26 feb. 2015
Mathematics, Bachelor, Mathematical Sciences, University College Cork
Datum van toekenning: 31 okt. 2013
Vingerafdruk
- 1 Soortgelijke profielen
Samenwerkingen en hoofdonderzoeksgebieden uit de afgelopen vijf jaar
Projecten
- 1 Afgelopen
-
MATRyOSka: NWO/Complexity/MATRyOSka
van Riel, N. A. W. (Project Manager), O'Donovan, S. (Projectmedewerker), Arts, I. C. W. (Projectmedewerker) & Afman, L. A. (Projectmedewerker)
1/10/17 → 30/06/23
Project: Onderzoek direct
-
Diurnal differences in postprandial glucose and triglyceride metabolism reveal metabolic flexibility and resilience
Dörner, R., Hägele, F., O'Donovan, S. D., Miles-Chan, J. L., Müller, M. & Bosy-Westphal, A. (Corresponding author), 1 mei 2025, In: American Journal of Physiology : Cell Physiology. 328, 5, blz. C1383-C1388 6 blz.Onderzoeksoutput: Bijdrage aan tijdschrift › Tijdschriftartikel › Academic › peer review
-
Physiology-informed regularisation enables training of universal differential equation systems for biological applications
de Rooij, M. (Corresponding author), Erdős, B., van Riel, N. A. W. & O'Donovan, S. D., jan. 2025, In: PLoS Computational Biology. 21, 1, 19 blz., e1012198.Onderzoeksoutput: Bijdrage aan tijdschrift › Tijdschriftartikel › Academic › peer review
Open AccessBestand15 Downloads (Pure) -
Leveraging continuous glucose monitoring for personalized modeling of insulin-regulated glucose metabolism
Erdős, B. (Corresponding author), O'Donovan, S. D., Adriaens, M. E., Gijbels, A., Trouwborst, I., Jardon, K. M., Goossens, G. H., Afman, L. A., Blaak, E. E., van Riel, N. A. W. & Arts, I. C. W., 5 apr. 2024, In: Scientific Reports. 14, 1, 8037.Onderzoeksoutput: Bijdrage aan tijdschrift › Tijdschriftartikel › Academic › peer review
Open AccessBestand3 Citaten (Scopus)52 Downloads (Pure) -
Quantifying the effect of nutritional interventions on metabolic resilience using personalized computational models
O'Donovan, S. (Corresponding author), Rundle, M., Thomas, E. L., Bell, J. D., Frost, G., Jacobs, D. M., Wanders, A., de Vries, R., Mariman, E. C. M., van Baak, M. A., Sterkman, L., Nieuwdorp, M., Groen, A. K., Arts, I. C. W., van Riel, N. A. W. & Afman, L., 19 apr. 2024, In: iScience. 27, 4, 16 blz., 109362.Onderzoeksoutput: Bijdrage aan tijdschrift › Tijdschriftartikel › Academic › peer review
Open AccessBestand2 Citaten (Scopus)63 Downloads (Pure) -
Accelerating Dynamic Modelling and Parameter Estimation in Biology using the Julia Programming Language
de Rooij, M., Erdős, B., van Riel, N. A. W. & O'Donovan, S., 2023.Onderzoeksoutput: Bijdrage aan congres › Poster
-
The Mixed Meal Model; quantifying metabolic resilience in overweight and obesity
O'Donovan, S. (Spreker)
8 okt. 2022 → 12 okt. 2022Activiteit: Types gesprekken of presentaties › Aangemelde presentatie › Wetenschappelijk
-
Digital metabolic twins; quantifying metabolic resilience in overweight/obesity
O'Donovan, S. (Spreker)
25 mei 2022Activiteit: Types gesprekken of presentaties › Aangemelde presentatie › Wetenschappelijk
-
Quantifying metabolic resilience; getting the most out of your challenge test data.
O'Donovan, S. (Spreker)
5 mei 2022Activiteit: Types gesprekken of presentaties › Aangemelde presentatie › Wetenschappelijk
-
Quantifying metabolic resilience; getting the most out of your challenge test data
O'Donovan, S. (Spreker)
4 mei 2022 → 7 mei 2022Activiteit: Types gesprekken of presentaties › Aangemelde presentatie › Wetenschappelijk
-
Digital Twins; quantifying metabolic resilience from meal response data
O'Donovan, S. (Spreker)
15 jun. 2021Activiteit: Types gesprekken of presentaties › Genodigd spreker › Wetenschappelijk
Cursussen
Knipsels
-
Data on Proinsulin Reported by Bart van Sloun and Colleagues (Quantifying postprandial glucose responses using a hybrid modeling approach: Combining mechanistic and data-driven models in The Maastricht Study)
van Riel, N. A. W. & O'Donovan, S.
10/08/23
1 item van Media-aandacht
Pers / media: Vakinhoudelijk commentaar