Data of Graduation Project 'Anisotropic Swelling of a Cylindrical Hydrogel'

Dataset

Omschrijving

The data is generated as part of the graduation project 'Anisotropic Swelling of a Cylindrical Hydrogel'.

The data is generated via Mathematica Notebooks that can be retrieved directly from the GitHub. These notebooks are annotated, and the data provided here can be reproduced by using the appropriate parameters. The Mathematica notebooks can be subdivided in two categories, namely 1) Notebooks that generate data and 2) Notebooks that analyze the data. Notebooks that are used to analyze the data must be adjusted to import the data correctly. ReadMe-files are added to guide you through the process when using these notebooks.  

The data that is stored here can be subdivided into three different sets:

Data - spring models.zip. This data is related to the spring model as introduced in part I of the thesis.Data – Spherical Poroelasticity Model.zip. This data is related to the spherical poroelastic model as introduced in the appendix of the thesis.Data – Cylindrical Poroelasticity Model.zip. This data is related to the cylindrical poroelastic model as introduced in part II of the thesis.

Each of these folders are subdivided into folders, which contain the following data:

Data – spring models.zip.

Read the ReadMe-Information-Data.txt for more information. Each folder contains the data that is generated by the notebook 'discrete3Dmodel-meanB-experimental3kDa.nb'. The numbers indicated the values for Ka, Kb and Kc before and after the transition respectively.

Data is used to generate figure 3.3 of the report.

Data – Spherical Poroelasticity Model.zip.

Typical results for spherical hydrogel. Folder contains the data that is generated by the notebook Spherical-swelling-notebook.wl with the parameters as provided in the folder.

Data is used to generate figure C.2, C.3 of the report

Effect of grid size N - N = 5. Folder contains the data that is generated by the notebook Spherical-swelling-notebook.wl with the parameters as provided in the folder.

Data is used to generate figure C.3 of the report

Effect of chemical potential mu - mu = 0. Folder contains the data that is generated by the notebook Spherical-swelling-notebook.wl with the parameters as provided in the folder.

Data is used to generate figure C.3 of the report

Data – Cylindrical Poroelasticity Model.zip.

Equilibrium Dynamics. Folder contains data generated by the notebook Cylinder-finalversion-annotated.wl with the parameters as provided in the folder.

Data is used to generate figures 6.1 – 6.4 of the report

Anisotropy parameters. Folder contains data for different anisotropy parameters generated by the notebook Cylinder-finalversion-annotated.wl with the parameters as provided in the folder.

Data is used to generate figures 6.5 – 6.7 of the report

Relative Humidity Rate. Folder contains data for different rates (i.e. different times) and different gridpoints generated by the notebook Cylinder-finalversion-annotated.wl with the parameters as provided in the folder.

Data is used to generate figures 6.8 – 6.10 of the report

Transition. Folder contains data for transitions with different properties generated by the notebook Cylinder-finalversion-annotated.wl with the parameters as provided in the folder.

Data is used to generate figures 6.11 – 6.14, E.1 – E.8 of the report

The other figures in the report are generated without explicit data storage, and can (in most cases) be generated directly with the appropriate notebook provided at GitHub.

The correct version on GitHub used for generating the data can be found via https://github.com/QBraat/Cylindrical-Gel-Swelling/releases/tag/v1.0.
Datum van beschikbaarheid22 jul. 2021
UitgeverZenodo

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