The Dynamics of Viruslike Capsid Assembly and Disassembly

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Abstract

Cowpea chlorotic mottle virus (CCMV) is a widely used model for virus replication studies. A major challenge lies in distinguishing between the roles of the interaction between coat proteins and that between the coat proteins and the viral RNA in assembly and disassembly processes. Here, we report on the spontaneous and reversible size conversion of the empty capsids of a CCMV capsid protein functionalized with a hydrophobic elastin-like polypeptide which occurs following a pH jump. We monitor the concentrations of T = 3 and T = 1 capsids as a function of time and show that the time evolution of the conversion from one T number to another is not symmetric: The conversion from T = 1 to T = 3 is a factor of 10 slower than that of T = 3 to T = 1. We explain our experimental findings using a simple model based on classical nucleation theory applied to virus capsids, in which we account for the change in the free protein concentration, as the different types of shells assemble and disassemble by shedding or absorbing single protein subunits. As far as we are aware, this is the first study confirming that both the assembly and disassembly of viruslike shells can be explained through classical nucleation theory, reproducing quantitatively results from time-resolved experiments.

Original languageEnglish
Pages (from-to)12608-12612
Number of pages5
JournalJournal of the American Chemical Society
Volume144
Issue number28
DOIs
Publication statusPublished - 20 Jul 2022

Funding

S.B.P.E.T. and J.C.M.v.H acknowledge financial support from the European Research Council (ERC Advanced Grant Artisym 694120) and the Dutch Ministry of Education, Culture and Science (Gravitation program 024.001.035). R.Z. acknowledges support from NSF DMR-2131963 and the University of California Multicampus Research Programs and Initiatives (grant no. M21PR3267).

FundersFunder number
National Science FoundationDMR-2131963
University of CaliforniaM21PR3267
European Union's Horizon 2020 - Research and Innovation Framework Programme694120
European Union's Horizon 2020 - Research and Innovation Framework Programme
Ministerie van Onderwijs, Cultuur en Wetenschap024.001.035

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