Abstract
At the typical spatial resolution of MRI in the human brain, approximately 60–90% of voxels contain multiple fiber populations. Quantifying microstructural properties of distinct fiber populations within a voxel is therefore challenging but necessary. While progress has been made for diffusion and T1-relaxation properties, how to resolve intra-voxel T2 heterogeneity remains an open question. Here a novel framework, named COMMIT-T2, is proposed that uses tractography-based spatial regularization with diffusion-relaxometry data to estimate multiple intra-axonal T2 values within a voxel. Unlike previously-proposed voxel-based T2 estimation methods, which (when applied in white matter) implicitly assume just one fiber bundle in the voxel or the same T2 for all bundles in the voxel, COMMIT-T2 can recover specific T2 values for each unique fiber population passing through the voxel. In this approach, the number of recovered unique T2 values is not determined by a number of model parameters set a priori, but rather by the number of tractography-reconstructed streamlines passing through the voxel. Proof-of-concept is provided in silico and in vivo, including a demonstration that distinct tract-specific T2 profiles can be recovered even in the three-way crossing of the corpus callosum, arcuate fasciculus, and corticospinal tract. We demonstrate the favourable performance of COMMIT-T2 compared to that of voxelwise approaches for mapping intra-axonal T2 exploiting diffusion, including a direction-averaged method and AMICO-T2, a new extension to the previously-proposed Accelerated Microstructure Imaging via Convex Optimization (AMICO) framework.
| Original language | English |
|---|---|
| Article number | 117617 |
| Journal | Neuroimage |
| Volume | 227 |
| DOIs | |
| Publication status | Published - 15 Feb 2021 |
| Externally published | Yes |
Funding
The work was supported by the Swiss National Science Foundation (SNSF, grants 31003A_157063 , 205320_175974 , and Ambizione grant PZ00P2_185814 to EJC-R). This work was also made possible thanks to the resources and expertise of the CIBM Center for Biomedical Imaging, a Swiss research center of excellence founded and supported by Lausanne University Hospital (CHUV), University of Lausanne (UNIL), Ecole Polytechnique Federale de Lausanne (EPFL), University of Geneva (UNIGE) and Geneva University Hospitals (HUG). DKJ, CMWT, and MC were all supported by a Wellcome Trust Investigator Award ( 096646/Z/11/Z ), CMWT by a Sir Henry Wellcome Fellowship (215944/Z/19/Z) and a Veni grant (17331) from the Dutch Research Council (NWO), and DKJ by a Wellcome Trust Strategic Award ( 104943/Z/14/Z ). The data were acquired at the UK National Facility for In Vivo MR Imaging of Human Tissue Microstructure funded by the EPSRC (grant EP/M029778/1 ), and The Wolfson Foundation.
| Funders | Funder number |
|---|---|
| Wellcome Trust | 096646/Z/11/Z |
| Engineering and Physical Sciences Research Council | EP/M029778/1 |
| École Polytechnique Fédérale de Lausanne | |
| Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung | PZ00P2_185814, 205320_175974, 31003A_157063 |
| Nederlandse Organisatie voor Wetenschappelijk Onderzoek | 104943/Z/14/Z |
| University of Geneva |
Keywords
- COMMIT
- Diffusion MRI
- Human brain
- T relaxometry
- Tractography
- White matter
- Brain Mapping/methods
- Humans
- White Matter/diagnostic imaging
- Axons
- Brain/diagnostic imaging
- Algorithms
- Computer Simulation
- Image Processing, Computer-Assisted/methods
- Diffusion Magnetic Resonance Imaging/methods
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