Parameter Estimation of a Physiological Diabetes Model Using Neural Networks

Ana Moreira, Maren Philipps, Natal van Riel

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)

Abstract

Diabetes Mellitus is a chronic disease characterized by elevated glucose levels in the blood due to deregulated insulin levels. The management of diabetes is greatly based on self-management of the patient by insulin injections, diet and exercise. Because of this, the study of mathematical models capable of describing the glucose-insulin metabolism in patients with diabetes can be a great tool to help this management. An example of such model, which has been extensively used, is the Eindhoven Diabetes Education Simulator (E-DES) model. Systems biology is a field of study focused on the structure and dynamics of biological systems, and mathematical modelling of these systems through non-linear ordinary differential equations. Parameter estimation, the process of determining the values of undetermined parameters in a mathematical model, is important for achieving reliable predictive models. Many parameter estimation methods exist, including traditional optimization methods and newer techniques such as artificial neural networks, in particular Systems Biology Informed Neural Networks (SBINNs). The goal of this study was to evaluate the performance of SBINNs in estimating E-DES parameters and in fitting to simulated glucose and insulin plasma measurements. Considering different variations of SBINNs, we were able to find a network capable of estimating some of the most important parameters of the E-DES model using simulated plasma glucose and insulin data with a good performance on simulated data.
Original languageEnglish
Title of host publication2023 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2023
PublisherInstitute of Electrical and Electronics Engineers
Number of pages8
ISBN (Electronic)979-8-3503-1017-7
DOIs
Publication statusPublished - 2 Oct 2023
Event2023 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) - Eindhoven, Netherlands
Duration: 29 Aug 202331 Aug 2023

Conference

Conference2023 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)
Country/TerritoryNetherlands
CityEindhoven
Period29/08/2331/08/23

Funding

ACKNOWLEDGMENTS This work was developed as part of the Erasmus+ Traineeships programme of Ana Moreira. Maren Philipps was funded by the Federal Ministry for Education and Research/BMBF (project GENImmune, grant number 031L0292F). Natal van Riel received funding from the Dutch Research Council (NWO) for the project DiaGame (project number 628.011.027), part of the research programme Data2Person.

FundersFunder number
Bundesministerium für Bildung und Forschung031L0292F
Nederlandse Organisatie voor Wetenschappelijk Onderzoek628.011.027

    Keywords

    • Parameter estimation
    • Biological system modeling
    • Computational modeling
    • Systems biology
    • Mathematical models
    • Diabetes
    • Glucose
    • systems biology
    • modeling
    • Systems Biology-Informed Neural Networks
    • neural networks
    • diabetes

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