Parallelizing Biochemical Stochastic Simulations: A Comparison of GPUs and Intel Xeon Phi Processors

Paolo Cazzaniga; F. Ferrara; Marco S. Nobile; Daniela Besozzi; Giancarlo Mauri

doi:10.1007/978-3-319-21909-7_36

Parallelizing Biochemical Stochastic Simulations: A Comparison of GPUs and Intel Xeon Phi Processors

Paolo Cazzaniga, F. Ferrara, Marco S. Nobile, Daniela Besozzi, Giancarlo Mauri

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

Original language	English
Title of host publication	Parallel Computing Technologies
Subtitle of host publication	13th International Conference, PaCT 2015, Petrozavodsk, Russia, August 31-September 4, 2015, Proceedings
Editors	Victor Malyshkin
Publisher	Springer
Pages	363-374
Number of pages	12
DOIs	https://doi.org/10.1007/978-3-319-21909-7_36
Publication status	Published - 2015
Externally published	Yes
Event	13th International Conference on Parallel Computing Technologies, PaCT 2015 - Petrozavodsk, Russian Federation Duration: 31 Aug 2015 → 4 Sept 2015 Conference number: 13

Publication series

Name	Lecture Notes in Computer Science (LNCS)
Volume	9251
ISSN (Print)	0302-9743
ISSN (Electronic)	1611-3349

Name	Theoretical Computer Science and General Issues (LNTCS)
Volume	9251

Conference

Conference	13th International Conference on Parallel Computing Technologies, PaCT 2015
Abbreviated title	PaCT 2015
Country/Territory	Russian Federation
City	Petrozavodsk
Period	31/08/15 → 4/09/15

Access to Document

10.1007/978-3-319-21909-7_36

Cite this

Cazzaniga, P., Ferrara, F., Nobile, M. S., Besozzi, D., & Mauri, G. (2015). Parallelizing Biochemical Stochastic Simulations: A Comparison of GPUs and Intel Xeon Phi Processors. In V. Malyshkin (Ed.), Parallel Computing Technologies: 13th International Conference, PaCT 2015, Petrozavodsk, Russia, August 31-September 4, 2015, Proceedings (pp. 363-374). (Lecture Notes in Computer Science (LNCS); Vol. 9251), (Theoretical Computer Science and General Issues (LNTCS); Vol. 9251). Springer. https://doi.org/10.1007/978-3-319-21909-7_36

Cazzaniga, Paolo ; Ferrara, F. ; Nobile, Marco S. et al. / Parallelizing Biochemical Stochastic Simulations : A Comparison of GPUs and Intel Xeon Phi Processors. Parallel Computing Technologies: 13th International Conference, PaCT 2015, Petrozavodsk, Russia, August 31-September 4, 2015, Proceedings. editor / Victor Malyshkin. Springer, 2015. pp. 363-374 (Lecture Notes in Computer Science (LNCS)). (Theoretical Computer Science and General Issues (LNTCS)).

@inproceedings{a68f8de0e6af455c9affc06a25b05821,

title = "Parallelizing Biochemical Stochastic Simulations: A Comparison of GPUs and Intel Xeon Phi Processors",

author = "Paolo Cazzaniga and F. Ferrara and Nobile, {Marco S.} and Daniela Besozzi and Giancarlo Mauri",

year = "2015",

doi = "10.1007/978-3-319-21909-7_36",

language = "English",

series = "Lecture Notes in Computer Science (LNCS)",

publisher = "Springer",

pages = "363--374",

editor = "{ Malyshkin}, Victor",

booktitle = "Parallel Computing Technologies",

address = "Germany",

note = "13th International Conference on Parallel Computing Technologies, PaCT 2015, PaCT 2015 ; Conference date: 31-08-2015 Through 04-09-2015",

}

Cazzaniga, P, Ferrara, F, Nobile, MS, Besozzi, D & Mauri, G 2015, Parallelizing Biochemical Stochastic Simulations: A Comparison of GPUs and Intel Xeon Phi Processors. in V Malyshkin (ed.), Parallel Computing Technologies: 13th International Conference, PaCT 2015, Petrozavodsk, Russia, August 31-September 4, 2015, Proceedings. Lecture Notes in Computer Science (LNCS), vol. 9251, Theoretical Computer Science and General Issues (LNTCS), vol. 9251, Springer, pp. 363-374, 13th International Conference on Parallel Computing Technologies, PaCT 2015, Petrozavodsk, Russian Federation, 31/08/15. https://doi.org/10.1007/978-3-319-21909-7_36

Parallelizing Biochemical Stochastic Simulations: A Comparison of GPUs and Intel Xeon Phi Processors. / Cazzaniga, Paolo; Ferrara, F.; Nobile, Marco S. et al.
Parallel Computing Technologies: 13th International Conference, PaCT 2015, Petrozavodsk, Russia, August 31-September 4, 2015, Proceedings. ed. / Victor Malyshkin. Springer, 2015. p. 363-374 (Lecture Notes in Computer Science (LNCS); Vol. 9251), (Theoretical Computer Science and General Issues (LNTCS); Vol. 9251).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

TY - GEN

T1 - Parallelizing Biochemical Stochastic Simulations

T2 - 13th International Conference on Parallel Computing Technologies, PaCT 2015

AU - Cazzaniga, Paolo

AU - Ferrara, F.

AU - Nobile, Marco S.

AU - Besozzi, Daniela

AU - Mauri, Giancarlo

N1 - Conference code: 13

PY - 2015

Y1 - 2015

U2 - 10.1007/978-3-319-21909-7_36

DO - 10.1007/978-3-319-21909-7_36

M3 - Conference contribution

T3 - Lecture Notes in Computer Science (LNCS)

SP - 363

EP - 374

BT - Parallel Computing Technologies

A2 - Malyshkin, Victor

PB - Springer

Y2 - 31 August 2015 through 4 September 2015

ER -

Cazzaniga P, Ferrara F, Nobile MS, Besozzi D, Mauri G. Parallelizing Biochemical Stochastic Simulations: A Comparison of GPUs and Intel Xeon Phi Processors. In Malyshkin V, editor, Parallel Computing Technologies: 13th International Conference, PaCT 2015, Petrozavodsk, Russia, August 31-September 4, 2015, Proceedings. Springer. 2015. p. 363-374. (Lecture Notes in Computer Science (LNCS)). (Theoretical Computer Science and General Issues (LNTCS)). doi: 10.1007/978-3-319-21909-7_36