Abstract
Biosensors are compact devices that can be used at the point-of-care to measure low
quantities of biomarkers in a complex body fluid like blood or saliva. Many biomarkers
in the human body are protein molecules, for example the biomarkers that are used
for the diagnosis of myocardial infarction. Sensitive detection of protein biomarkers
in a biosensor is enabled by the use of molecules with a high specific affinity for
the biomarker; typically these are antibodies. The basic concept of a particle-based
biosensor is that the specific binding of antibodies to the protein biomarkers causes
particle labels to become attached to a sensor surface, and thereby the amount of
bound particles becomes a measure for the biomarker concentration in solution. The
sensitivity and specificity of the biosensor are determined by the specific as well as
the non-specific interactions in the assay. Non-specific interactions can for example
induce particle binding without biomarkers being present, leading to false positive
signals. Therefore it is important to reduce the non-specific interactions as much as
possible and to try to understand the underlying mechanisms.
Biosensor surfaces are often made of a polymeric material like polystyrene because
of its excellent manufacturing and modification properties. There are a number
of strategies to reduce non-specific binding on polymers, for example blocking of the
surface with a protein like BSA or increasing the surface hydrophilicity by an oxidative
treatment. Within the non-specific binding processes several physicochemical interactions
play a role like electrostatic, van derWaals, hydrogen bonding, hydrophobic
and steric or roughness related interactions; and on top of that protein conformations
can change. However, the effects of the surface treatments on non-specific interactions
with particles and single proteins have not been characterized and understood in detail.
The first topic addressed in this work was to develop a model polystyrene surface
with well controlled properties that could be varied to influence the non-specific interactions.
We chose a spincoated polystyrene surface that was flat on the scale of
proteins (as shown by AFM measurements, Rq <0.55 nm) to minimize the role of
roughness in the interactions. The polymer surfaces were treated with UV/ozone in
order to control the hydrophilicity of the surface. A direct relation was observed between
treatment time and hydrophilicity, with an increase of surface oxygen content
(measured by XPS, upto 24% from 300 s oxidation) causing a reduction of water
contact angle. These UV/ozone treated polystyrene surfaces with a range of different
hydrophilicities yield a platform for studying protein interactions.
The first interaction we quantified was the non-specific association of proteincoated
particles to the polystyrene surface. We described the interaction with an energy
barrier for association that depends on the properties of both the surface and
the solution. The experiments were performed with superparamagnetic particles; such
particles are known to be suitable labels in integrated high-sensitivity biosensors due
to the fact that the particles can be manipulated by magnetic fields. The particles consist
of a polystyrene matrix filled with magnetic nanoparticles. In our experiments the
particles were coated with myoglobin, a well-established cardiac biomarker. A new
technique, the rotating particles probe, was used to quantify the fraction of unbound
particles by measuring their response to a rotating magnetic field. To describe the
non-specific binding process we propose a model with a distribution of energy barrier
values and this model was shown to accurately fit the measured data. The extracted
parameters signified high energy barrier values for binding on surfaces with long oxidation
times and for solutions with high pH or low ionic strength. Both hydrophilicity
and electrostatic interactions play an important role in the observed non-specific
association. The energy barrier for association could be quantified by using the energy
barrier spread from dissociation measurements: at physiological buffer conditions
(150 mM) the energy barriers were found in the range 0–60 kBT.
Next, we studied the dissociation of non-specifically bound particles. For this purpose
we used magnetic tweezers and the same protein-coated particles as for the association
measurements. Forces applied by the magnetic field gradient were calibrated
by time-of-flight measurements. The force-induced dissociation measurements were
performed by recording the number of bound particles as a function of time during
the application of a constant force of 30 pN, 50 pN or 70 pN. The data appear not to
obey the dissociation kinetics of bonds with a single energy barrier as in the standard
Bell model. We show that the dissociation of the non-specific bonds can be modeled
with a distribution of energy barrier values. The fits reveal that the energy barrier for
unbinding decreases for increasing oxidation time (from 90 s to 300 s) from 38 kBT
to 25 kBT with a constant spread of (7 4) kBT. So the association as well as the
dissociation experiments show that the hydrophilicity of the surface is an important
determinant for non-specific interactions; and both processes reveal a distribution of
energy barriers rather than a single energy barrier.
Finally, we zoomed in on the non-specific interaction between single proteins and
a polystyrene surface. AFM tips were functionalized with single myoglobin molecules
and force–distance curves were recorded. In the retraction curves clear steps were
observed. These steps entail that the tip does not detach from the surface at once.
The events appearing in between the steps have two different characteristics: either
the force stays constant during retraction or the force increases like the stretching of
a spring. There are two processes to which these events can be attributed: first, the
pulling of polymer chains from the polystyrene surface and, second, disruption associated
with the protein structure. The data reveal that the non-specific interaction
between a single protein and a polymer surface can be stronger than the internal structure
of the protein.
These results provide new experimental approaches to study non-specific interactions
between protein-coated particles and biosensor surfaces. We have learned that
the interactions can be described by a generalized interaction potential that is characteristic for the properties of the surface and the composition of the solution. An
important finding is that the energy barriers for association as well as for dissociation
are given by a distribution rather than a single value or a set of values. Furthermore,
first experiments on the non-specific binding of a single myoglobin molecule showed
that the non-specific forces can be stronger than the internal protein structure. Overall,
the experiments form a first step and foundation for the study of non-specific interactions
between polymer surfaces and protein-coated particles as well as single protein
molecules. Further research should focus on extensions to different proteins, surfaces
and solution compositions, in order to study the validity range of the model descriptions;
and on a stepwise increase of the complexity of the materials system with the
aim to develop a complete understanding of the specific and non-specific interactions
in biosensor assays.
Original language | English |
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Qualification | Doctor of Philosophy |
Awarding Institution |
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Supervisors/Advisors |
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Award date | 3 Jun 2013 |
Place of Publication | Eindhoven |
Publisher | |
Print ISBNs | 978-90-386-3379-4 |
DOIs | |
Publication status | Published - 2013 |