Exploring the Effect of Dataset Diversity in Self-supervised Learning for Surgical Computer Vision

Tim J.M. Jaspers (Corresponding author), Ronald L.P.D. de Jong, Yasmina Al Khalil, Tijn Zeelenberg, Koen Kusters, Yiping Li, Romy C. van Jaarsveld, Franciscus H.A. Bakker, Jelle P. Ruurda, Willem M. Brinkman, Peter H.N. de With, Fons van der Sommen

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Abstract

Over the past decade, computer vision applications in minimally invasive surgery have rapidly increased. Despite this growth, the impact of surgical computer vision remains limited compared to other medical fields like pathology and radiology, primarily due to the scarcity of representative annotated data. Whereas transfer learning from large annotated datasets such as ImageNet has been conventionally the norm to achieve high-performing models, recent advancements in self-supervised learning (SSL) have demonstrated superior performance. In medical image analysis, in-domain SSL pretraining has already been shown to outperform ImageNet-based initialization. Although unlabeled data in the field of surgical computer vision is abundant, the diversity within this data is limited. This study investigates the role of dataset diversity in SSL for surgical computer vision, comparing procedure-specific datasets against a more heterogeneous general surgical dataset across three different downstream surgical applications. The obtained results show that using solely procedure-specific data can lead to substantial improvements of 13.8%, 9.5%, and 36.8% compared to ImageNet pretraining. However, extending this data with more heterogeneous surgical data further increases performance by an additional 5.0%, 5.2%, and 2.5%, suggesting that increasing diversity within SSL data is beneficial for model performance. The code and pretrained model weights are made publicly available at https://github.com/TimJaspers0801/SurgeNet.
Original languageEnglish
Title of host publicationData Engineering in Medical Imaging
Subtitle of host publicationSecond MICCAI Workshop, DEMI 2024, Held in Conjunction with MICCAI 2024, Marrakesh, Morocco, October 10, 2024, Proceedings
EditorsBinod Bhattarai, Sharib Ali, Anita Rau, Razvan Caramalau, Anh Nguyen, Prashnna Gyawali, Ana Namburete, Daniel Stoyanov
Place of PublicationCham
PublisherSpringer
Pages43-53
Number of pages11
ISBN (Electronic)978-3-031-73748-0
ISBN (Print)978-3-031-73747-3
DOIs
Publication statusPublished - 25 Oct 2024
Event2nd MICCAI Workshop on Data Engineering in Medical Imaging, DEMI 2024 - Marrakesh, Morocco
Duration: 10 Oct 202410 Oct 2024

Publication series

NameLecture Notes in Computer Science (LNCS)
Volume15265
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Workshop

Workshop2nd MICCAI Workshop on Data Engineering in Medical Imaging, DEMI 2024
Abbreviated titleDEMI 2024
Country/TerritoryMorocco
CityMarrakesh
Period10/10/2410/10/24

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