Case study : Visualization of annotated DNA sequences

T.H.J.M Peeters, M.W.E.J. Fiers, H.M.M. Wetering, van de, J.P. Nap, J.J. Wijk, van

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Abstract

DNA sequences and their annotations form ever expanding data sets. Proper explorations of such data sets require new tools for visualization and analysis. In this case study, we have defined the requirements for a visualization tool for annotated DNA sequences.We have implemented these requirements in a new and flexible tool for browsing and comparing annotated DNA sequences interactively and in real-time. The use of standard information visualization techniques, such as linked windows, perspective walls, and smooth interaction, enables genome researchers to obtain better insight in large DNA data sets in an effective, efficient, and attractive way.
Original languageEnglish
Title of host publicationVisSym 2004 (Proceedings Symposium on Visualization, Konstanz, Germany, May 19-21, 2004)
EditorsO. Deussen, C.D. Hansen, D.A. Keim, D. Saupe
Place of PublicationAire-la-Ville, Switzerland
PublisherEurographics Association
Pages109-114
ISBN (Print)3-905673-07-X
Publication statusPublished - 2004

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Peeters, T. H. J. M., Fiers, M. W. E. J., Wetering, van de, H. M. M., Nap, J. P., & Wijk, van, J. J. (2004). Case study : Visualization of annotated DNA sequences. In O. Deussen, C. D. Hansen, D. A. Keim, & D. Saupe (Eds.), VisSym 2004 (Proceedings Symposium on Visualization, Konstanz, Germany, May 19-21, 2004) (pp. 109-114). Aire-la-Ville, Switzerland: Eurographics Association.