Personal profile
Research profile
Tom de Greef leads pioneering research programs at the interface of synthetic biology, molecular computing, and engineered living systems. At the Centre of Living Technologies, we develop emergent technologies based on biological principles, pushing the boundaries of what's possible in biological computing, DNA-based data storage, and engineered cellular systems.
Research Vision
Our research group focuses on developing next-generation living technologies that bridge the gap between synthetic biology, chemistry, and computer science. We are particularly interested in how molecular systems can be programmed to process information, store data, and perform complex tasks. This interdisciplinary approach allows us to tackle fundamental questions while developing practical applications in biotechnology and materials science.
Key Research Areas:
- Biological Computing Devices: Developing programmable molecular systems capable of information processing and computation
- DNA-based Digital Data Storage: Creating innovative solutions for long-term data storage using DNA as a medium
- Engineered Living Materials: Designing smart materials with life-like properties and functionalities
- Synthetic Cell Engineering: Building artificial cells and cellular networks for applications in biotechnology
- Digital Chemistry: Advancing chemical synthesis through computational approaches and automation
- Protocell Communication: Engineering synthetic cell-like systems capable of information processing and communication
Research Impact & Recognition:
- Published over 100 peer-reviewed articles in high-impact journals including Nature, Nature Chemistry, and Nature Nanotechnology
- Multiple prestigious grants including ERC Starting, Consolidator, and PoC grants
- Recipient of the 2017 Cram-Lehn-Pedersen Prize in Supramolecular Chemistry
- VICI, VIDI, and VENI laureate
- Regular speaker at international conferences and symposia
Leadership & Collaboration:
- Founding member of the Centre of Living Technologies (https://livingtechnologies.ewuu.nl/)
- Principal Investigator leading a large research group TU/e.
- Successful supervision of >15 PhD students and multiple postdocs
- Core member of the Institute for Complex Molecular Systems (ICMS)
- Member of the Young Academy of the Royal Netherlands Academy of Arts and Sciences
- Fellow of the Netherlands Academy of Engineering.
- Extensive collaboration network with leading academic institutions
Academic background
Tom de Greef studied Biomedical Engineering at Eindhoven University of Technology (TU/e, the Netherlands), where he received his MSc degree cum laude in 2004. He then started his PhD research at the TU/e department of Chemical Engineering and Chemistry, where he graduated in 2009 on a thesis on novel polymeric materials based on quadruple hydrogen-bonding motifs, supervised by professors E. W. (Bert) Meijer and Rint Sijbesma. He subsequently moved to the Computational Biology group at the TU/e department of Biomedical Engineering (TU/e) headed by Prof. Peter Hilbers, for postdoctoral research on self-assembling systems from a computational perspective. In 2010, he became assistant professor, in 2016 associate professor and in 2022 he was promoted to full professor Synthetic Biology. In 2013, Tom de Greef was a visiting scholar in the group of Prof. David Weitz at Harvard University (Cambridge, USA), working on protein affinity screening using droplet microfluidics.
In 2012 and 2013 the Netherlands Organization of Scientific Research (NWO) awarded him a VENI grant and an ECHO-STIP grant, respectively. He received an ERC Starting Grant in 2015, an NWO VIDI grant in 2016, an ERC Consolidator Grant in 2020 and an NWO VICI grant in 2023. Tom de Greef is a core member of the Institute for Complex Molecular Systems (ICMS) and a founding member of the Institute for Living Technologies. He is a founding member of the Eindhoven Young Academy of Engineering and a member of De Jonge Akademie since 2019. He received the 2017 Cram Lehn Pedersen prize in supramolecular chemistry, the 2022 Groundbreaking TU/e researcher award and in 2018 he was awarded a Microsoft PhD scholarship for the development of micromaterials for DNA datastorage.
Quote
Synthetic biology can help address key challenges facing the planet and its population. Research in synthetic biology may lead to new technologies such as programmed cells that self-assemble at the sites of disease to repair damage.
External positions
Visiting Scholar, Harvard University
1 Apr 2013 → 10 Oct 2013
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 3 Good Health and Well-being
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Collaborations and top research areas from the last five years
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A modular nanoparticle vaccine platform for tailored antigen and adjuvant delivery
de Dreu, A., Schrijver, D. P., Cremers, G. A. O., de Bruin, K., Vos, B. N., Anbergen, T., van Elsas, Y., Versteeg, I., Zwolsman, R., Deckers, J., Timmers, M., Roelofs, S., Darwish, Y., van der Staak, M., Priem, B., Maas, R. J. F., de Leeuw, P., Ros, G., Bartelet, B. & Hendrikx, M. & 14 others, , 2026, (Submitted) In: Nature Communications. XXResearch output: Contribution to journal › Article › Academic › peer-review
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Engineered microRNA feedback circuits enable tunable and autonomous control of synthetic receptor activity
Nathalia, B. L., Makri Pistikou, A.-M., Meuleman, T., Nijenhuis, W., Gumustop, D., Gonzalez Garcia, E., Love, K., Doensen, W. H. M., van Galen, A., Galloway, K. E., Kapitein, L. C. & de Greef, T. F. A., 11 Feb 2026, (Submitted).Research output: Contribution to conference › Abstract › Academic
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Engineering a transmembrane receptor for coacervate-based artificial cells
van Veldhuisen, T. W., Raeven, L. M. V., van Herwijnen, N. G. L., Nathalia, B. L., Meuleman, T., Le, H. T. D., Gräwe, A., Remacha Goñi, V., Makri Pistikou, A.-M., Brunsveld, L., Merkx, M., de Greef, T. F. A. & van Hest, J. C. M., 2026, (Submitted) In: Journal of the American Chemical Society.Research output: Contribution to journal › Article › Academic
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Engineering synthetic receptor cascades for programmable multicellular communication
Lorenzo García, D., Nathalia, B. L., Derks, M. & de Greef, T. F. A., 2026.Research output: Contribution to conference › Abstract › Academic
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PhaseTransfer: A transfer learning framework for efficient phase diagram mapping
Gonzalez Garcia, E., Markvoort, A. J., Erkamp, N. & de Greef, T. F. A., 2026, (Submitted) In: npj Computational Materials.Research output: Contribution to journal › Article › Academic
Prizes
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Compartmentalized DNA Computers for In-Vitro Diagnostic Applications
de Greef, T. F. A. (Recipient), 2019
Prize: ERC › Proof of concept › Scientific
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COST Action CM0703
de Greef, T. F. A. (Recipient), 2011
Prize: Other › Discipline related › Professional
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Cram Lehn Pedersen Prize
de Greef, T. F. A. (Recipient), 2017
Prize: Other › Discipline related › Scientific
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DNA Encryption of Compartmentalized DNA Files
de Greef, T. F. A. (Recipient), 2024
Prize: ERC › Proof of concept › Scientific
Courses
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System estimation and control for biology
van Riel, N. A. W. & de Greef, T. F. A. 1/09/13 → 31/08/26
Course
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Thermodynamics & chemical kinetics
Bosnacki, D., de Greef, T. F. A. & Markvoort, A. J. 1/09/24 → 31/08/26
Course
Press/Media
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De Netherlands Academy of Engineering installeert tien Fellows
12/12/24
1 item of Media coverage
Press/Media: Public Engagement Activities
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You can store millions of terabytes in one gram of DNA
1/06/23
1 item of Media coverage
Press/Media: Expert Comment
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Studies from Eindhoven University of Technology Update Current Data on Information Technology (Dna Storage In Thermoresponsive Microcapsules for Repeated Random Multiplexed Data Access)
de Greef, T. F. A., Mulder, W. J. M., Yang, S., Makri Pistikou, A.-M., Gascoigne, L. & Schrijver, D. P.
1/06/23
1 item of Media coverage
Press/Media: Expert Comment
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‘We can expect DNA data centers around 2030’
25/05/23
1 item of Media coverage
Press/Media: Expert Comment
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The power of genetics — how research into gene sequencing could revolutionize biopharma
23/05/23
1 item of Media coverage
Press/Media: Expert Comment
Research areas
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DNA data storage and DNA computing
de Greef, T. (Researcher) & Slothouber, M. (Content manager)
Impact: Research Topic/Theme (at group level)
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Mammalian synthetic biology
de Greef, T. (Researcher) & Slothouber, M. (Content manager)
Impact: Research Topic/Theme (at group level)
Thesis
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Towards stepwise synthesis of well-defined ureidophtalimide oligomers
de Greef, T. F. A. (Author), van Gorp, J. J. (Supervisor 1), Vekemans, J. A. J. M. (Supervisor 2), Meijer, E. W. (Supervisor 2), Sijbesma, R. P. (Supervisor 2) & Pieterse, K. (Supervisor 2), 31 Oct 2004Student thesis: Master