• 9278 Citations
19952020

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2019

Approximation of a pipeline of unsupervised retina image analysis methods with a CNN

Heslinga, F., Pluim, J., Dasht Bozorg, B., Berendschot, T., Houben, A. J. H. M., Henry, R. M. A. & Veta, M., 1 Mar 2019, Image Processing: SPIE Medical Imaging, 2019, San Diego, California, United States. Angelini, E. D. & Landman, B. A. (eds.). Bellingham: SPIE, 7 p. 109491N. (Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
File
1 Citation (Scopus)
37 Downloads (Pure)

Convolutional neural network-based regression for quantification of brain characteristics using MRI

Fernandes, J., Alves, V., Khalili, N., Benders, M. J. N. L., Išgum, I., Pluim, J. & Moeskops, P., 30 Mar 2019, New Knowledge in Information Systems and Technologies. Reis, L. P., Costanzo, S., Adeli, H. & Rocha, Á. (eds.). Berlin: Springer, Vol. 2. p. 577-586 10 p. (Advances in Intelligent Systems and Computing; vol. 931).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Downloads (Pure)

Convolutional neural networks for segmentation of the left atrium from gadolinium-enhancement MRI images

de Vente, C., Veta, M., Razeghi, O., Niederer, S., Pluim, J., Rhode, K. & Karim, R., 14 Feb 2019, Statistical Atlases and Computational Models of the Heart. Atrial Segmentation and LV Quantification Challenges - 9th International Workshop, STACOM 2018, Held in Conjunction with MICCAI 2018, Revised Selected Papers. McLeod, K., Mansi, T., Young, A., Rhode, K., Zhao, J., Li, S., Pop, M. & Sermesant, M. (eds.). Cham: Springer, p. 348-356 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11395 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)
4 Downloads (Pure)

Deep learning networks to segment and detect breast terminal duct lobular units, acini, and adipose tissue: a step toward the automated analysis of lobular involution as a marker for breast cancer risk

Onken, A., Wetstein, S., Pyle, M., Pluim, J., Schnitt, S., Baker, G., Collins, L., Tamimi, R., Veta, M. & Heng, Y., 2019, United States and Canadian Academy of Pathology (USCAP).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademic

Detection of acini in histopathology slides: towards automated prediction of breast cancer risk

Wetstein, S., Onken, A., Baker, G., Pyle, M., Pluim, J., Tamimi, R., Heng, Y. & Veta, M., 18 Mar 2019, Medical Imaging 2019: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). Bellingham, 7 p. 109560Q. (Proceedings of SPIE; vol. 10956).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)
6 Downloads (Pure)

Muti-shell diffusion MRI harmonisation and enhancement challenge (MUSHAC): progress and results

Ning, L., Bonet-Carne, E., Grussu, F., Sepehrband, F., Kaden, E., Veraart, J., Blumberg, S. B., Khoo, C. S., Palombo, M., Coll-Font, J., Scherrer, B., Warfield, S. K., Karayumak, S. C., Rathi, Y., Koppers, S., Weninger, L., Ebert, J., Merhof, D., Moyer, D., Pietsch, M. & 11 others, Christiaens, D., Teixeira, R., Tournier, J-D., Zhylka, A., Pluim, J., Parker, G., Rudrapatna, U., Evans, J., Charron, C., Jones, D. K. & Tax, C. W. M., 2019, Computational Diffusion MRI: International MICCAI Workshop, Granada, Spain, September 2018. Ning, L., Tax, C. M. W., Grussu, F., Bonet-Carne, E. & Sepehrband, F. (eds.). 226249 ed. Cham: Springer, p. 217-224 8 p. (Mathematics and Visualization).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademic

Open Access
File
2 Citations (Scopus)
58 Downloads (Pure)

Optimal input configuration of dynamic contrast enhanced MRI in convolutional neural networks for liver segmentation

Jansen, M. J. A., Kuijf, H. J. & Pluim, J. P. W., 2019, Medical Imaging 2019: Image Processing. Angelini, E. D., Angelini, E. D., Angelini, E. D. & Landman, B. A. (eds.). Bellingham: SPIE, 8 p. 109491V. (Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
File
1 Citation (Scopus)
1 Downloads (Pure)

Progressively growing convolutional networks for end-to-end deformable image registration

Eppenhof, K., Lafarge, M. & Pluim, J., 15 Mar 2019, Medical Imaging 2019 Image Processing. Landman, B. A. & Angelini, E. D. (eds.). Bellingham: SPIE, 7 p. 109491C. (Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
File
3 Citations (Scopus)
91 Downloads (Pure)
2018

Automatic classification of focal liver lesions based on clinical DCE-MR and T2-weighted images: a feasibility study

Jansen, M. J. A., Kuijf, H. J. & Pluim, J. P. W., 23 May 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. Piscataway: Institute of Electrical and Electronics Engineers, p. 245-248 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)

Deformable image registration using convolutional neural networks

Eppenhof, K. A. J., Lafarge, M. W., Moeskops, P., Veta, M. & Pluim, J. P. W., 15 Mar 2018, Medical Imaging 2018 Image Processing. Bellingham: SPIE, 6 p. 105740S. (Proceedings of SPIE; vol. 10574).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
File
19 Citations (Scopus)
859 Downloads (Pure)

Inferring a third spatial dimension from 2D histological images

Lafarge, M. W., Pluim, J. P. W., Eppenhof, K. A. J., Moeskops, P. & Veta, M., 23 May 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. Piscataway: IEEE Computer Society, Vol. 2018-April. p. 586-589 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Roto-translation covariant convolutional networks for medical image analysis

Bekkers, E. J., Lafarge, M. W., Veta, M., Eppenhof, K. A. J., Pluim, J. P. W. & Duits, R., 1 Jan 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Schnabel, J. A., Davatzikos, C., Alberola-López, C., Fichtinger, G. & Frangi, A. F. (eds.). Cham: Springer, p. 440-448 9 p. (Lecture Notes in Computer Science; vol. 11070).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

10 Citations (Scopus)
2017

Adversarial training and dilated convolutions for brain MRI segmentation

Moeskops, P., Veta, M., Lafarge, M. W., Eppenhof, K. A. J. & Pluim, J. P. W., 2017, Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support - 3rd International Workshop, DLMIA 2017 and 7th International Workshop, ML-CDS 2017 Held in Conjunction with MICCAI 2017, Proceedings. Springer, p. 56-64 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10553 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

33 Citations (Scopus)
2 Downloads (Pure)

Automatic segmentation of the intracranial volume in fetal MR images

Khalili, N., Moeskops, P., Claessens, N. H. P., Scherpenzeel, S., Turk, E., de Heus, R., Benders, M. J. N. L., Viergever, M. A., Pluim, J. P. W. & Išgum, I., 2017, Fetal, Infant and Ophthalmic Medical Image Analysis - International Workshop, FIFI 2017 and 4th International Workshop, OMIA 2017 Held in Conjunction with MICCAI 2017, Proceedings. Springer, p. 42-51 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10554 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

4 Citations (Scopus)

Domain-adversarial neural networks to address the appearance variability of histopathology images

Lafarge, M. W., Pluim, J. P. W., Eppenhof, K. A. J., Moeskops, P. & Veta, M., 2017, Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support - 3rd International Workshop, DLMIA 2017 and 7th International Workshop, ML-CDS 2017 Held in Conjunction with MICCAI 2017, Proceedings. Springer, p. 83-91 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10553 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

25 Citations (Scopus)
2 Downloads (Pure)

Exploring the similarity of medical imaging classification problems

Cheplygina, V., Moeskops, P., Veta, M., Dashtbozorg, B. & Pluim, J. P. W., 2017, Intravascular Imaging and Computer Assisted Stenting, and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 6th Joint International Workshops, CVII-STENT 2017 and 2nd International Workshop, LABELS 2017 Held in Conjunction with MICCAI 2017, Proceedings. Cardoso, M. J., Arbel, T. & et. al. (eds.). Cham: Springer, p. 59-66 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10552 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Citations (Scopus)
2 Downloads (Pure)

Motion correction of dynamic contrast enhanced MRI of the liver

Jansen, M. J. A., Veldhuis, W. B., van Leeuwen, M. S. & Pluim, J. P. W., 2017, Medical Imaging 2017: Image Processing. Angelini, E. D., Styner, M. A. & Angelini, E. D. (eds.). SPIE, 101331T. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10133).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Supervised local error estimation for nonlinear image registration using convolutional neural networks

Eppenhof, K. A. J. & Pluim, J. P. W., 24 Feb 2017, Medical Imaging 2017: Image Processing. Styner, M. A. & Angelini, E. D. (eds.). SPIE, 6 p. 101331U. (Proceedings of SPIE; vol. 10133)(Progress in Biomedical Optics and Imaging; vol. 18, no. 47).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
9 Citations (Scopus)
5 Downloads (Pure)

The truth is hard to make: validation of medical image registration

Pluim, J. P. W., Muenzing, S. E. A., Eppenhof, K. A. J. & Murphy, K., 13 Apr 2017, 2016 23rd International Conference on Pattern Recognition, ICPR 2016. Piscataway: Institute of Electrical and Electronics Engineers, p. 2294-2300 7 p. 7899978

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

6 Citations (Scopus)
1 Downloads (Pure)
2016

Automatic segmentation and registration of abdominal aortic aneurysms using 3D ultrasound

van Disseldorp, E. M. J., van Dronkelaar, J. J., Pluim, J. P. W., van de Vosse, F., van Sambeek, M. R. H. M. & Lopata, R. G. P., 1 Nov 2016, 2016 IEEE International Ultrasonics Symposium, IUS 2016. IEEE Computer Society, 4 p. 7728772

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)
11 Downloads (Pure)

Cutting out the middleman: measuring nuclear area in histopathology slides without segmentation

Veta, M., van Diest, P. J. & Pluim, J. P. W., 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer, p. 632-639 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9901).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

11 Citations (Scopus)
5 Downloads (Pure)
2015

Atlas-based mosaicing of 3D transesophageal echocardiography images of the left atrium

Mulder, H. W. H., Pluim, J. P. W., Ren, B. B., Haak, A. A., Viergever, M. A. M., Bosch, J. G. J. & Stralen, van, M. M., 2015, 2015 IEEE International Ultrasonics Symposium (IUS 2015) : Taipei, Taiwan, 21-24 October 2015. Piscataway: Institute of Electrical and Electronics Engineers, 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)

Retinal artery/vein classification via graph cut optimization

Eppenhof, K. A. J., Bekkers, E. J., Berendschot, T. T. J. M., Pluim, J. P. W. & ter Haar Romenij, B. M., 2015, Proceedings of the Ophthalmic Medical Image Analysis Second International Workshop, OMIA 2015. Chen, X., Garvin, M. K., Liu, J., Trucco, E. & Xu, Y. (eds.). p. 121-128

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
File
79 Downloads (Pure)
2014

Fast multiatlas selection using composition of transformations for radiation therapy planning

Rivest-Hénault, D., Ghose, S., Pluim, J. P. W., Greer, P. B., Fripp, J. & Dowling, J. A., 2014, Medical Computer Vision : Algorithms for Big Data: International Workshop, MCV 2014, Held in Conjunction with MICCAI 2014, Cambridge, Massachusetts, USA, September 18, 2014, Revised Selected Papers. Menze, B., Langs, G., Montillo, A., Kelm, M., Mueller, H., Zhang, S., Cai, W. & Metaxas, D. (eds.). Berlin: Springer, p. 105-115 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8848).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Citations (Scopus)

Registration of organs with sliding interfaces and changing topologies

Berendsen, F. F., Kotte, A. N. T. J., Viergever, M. A. & Pluim, J. P. W., 2014, Medical Imaging 2014: Image Processing, 16 - 18 February 2014, San Diego, CA. Ourselin, B. & Styner, M. A. (eds.). SPIE, (Proceedings of SPIE; vol. 9034).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

13 Citations (Scopus)
2 Downloads (Pure)

Segmentation of multiple heart cavities in wide-view fused 3D transesophageal echocardiograms

Haak, A., Mulder, H. W., Ren, B., Vegas-Sánchez-Ferrero, G., van Burken, G., Steen, van der, A. F. W., van Stralen, M., Pluim, J. P. W., Walsum, van, T. & Bosch, J. G., 20 Oct 2014, IEEE International Ultrasonics Symposium, IUS, 3-6 September 2014, Chicago, Illinois. Brussels: IEEE Computer Society, p. 691-694 4 p. 6932077

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)
2013

A patient specific 4D MRI liver motion model based on sparse imaging and registration

Noorda, Y. H., Bartels, L. W., Stralen, van, M. & Pluim, J. P. W., 2013, Medical Imaging 2013: Image-Guided Procedures, Robotic Interventions, and Modeling, 12 - 14 February 2013, Lake Buena Vista, Florida. Holmes III, D. R. & Yaniv, Z. R. (eds.). Washington: SPIE, p. 86710S-1/7 (Proceedings of SPIE; vol. 8671).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)
2 Downloads (Pure)

Detecting mitotic figures in breast cancer histopathology images

Veta, M., Diest, van, P. J. & Pluim, J. P. W., 2013, SPIE Medical Imaging Symposium 2013: Digital Pathology, 10 - 11 February 2013, Lake Buena Vista, Florida, USA. Gurcan, M. N. & Madabhushi, X. (eds.). Washington: SPIE, p. 867607-1/7 (Proceedings of SPIE; vol. 8676).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

26 Citations (Scopus)
3 Downloads (Pure)

Free-form registration involving disappearing structures : application to brachytherapy MRI

Berendsen, F. F., Kotte, A. N. T. J., Leeuw, de, A. A. C., Viergever, M. A. & Pluim, J. P. W., 2013, Abdominal Imaging: Computation and Clinical Applications, 5th International Workshop on Abdominal Imaging: Computation and Clinical Applications. Yoshida, H., Warfield, S. & Vannier, M. W. (eds.). Berlin: Springer, p. 136-144 (Lecture Notes in Computer Science; vol. 8198).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

3 Citations (Scopus)

Implicit surface registration with surface-oriented anisotropic deformation field smoothing

Pearlman, P. C., Išgum, I., Kersbergen, K. J., Benders, M. J. N. L., Viergever, M. A. & Pluim, J. P. W., 2013, From Nano to Macro : IEEE 10th International Symposium on Biomedical Imaging (ISBI 2013), 7 - 11 April 2013, San Francisco, CA. Piscataway: Institute of Electrical and Electronics Engineers, p. 480-483

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)

Rib detection in 3D MRI using dynamic programming based on vesselness and ridgeness

Noorda, Y. H., Bartels, L. W., Viergever, M. A. & Pluim, J. P. W., 2013, Abdominal Imaging : Computation and Clinical Applications, 5th International Workshop on Abdominal Imaging: Computation and Clinical Applications. Yoshida, H., Warfield, S. & Vannier, M. W. (eds.). Berlin: Springer, p. 212-220 (Lecture Notes in Computer Science; vol. 8198).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

3 Citations (Scopus)

Segmentation of 3D transesophageal echocardiograms by multi-cavity active shape model and gamma mixture model

Haak, A., Vegas-Sanchez-Ferrero, G., Mulder, H. H., Kirisli, H. A., Baka, N., Metz, C., Klein, S., Ren, B., van Burken, G., Steen, van der, A. F. W., Pluim, J. P. W., Walsum, van, T. & Bosch, J. G., 2013, Augmented Reality Environments for Medical Imaging and Computer-Assisted Interventions: 6th International Workshop (MIAR 2013). Liao, H., Linte, C. A., Masamune, K., Peters, T. M. & Zheng, G. (eds.). Berlin Heidelberg: Springer, p. 19-26 (Lecture Notes in Computer Science; vol. 8090).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

3 Citations (Scopus)

Simultaneous pairwise registration for image mosaicing of TEE data

Mulder, H. W. H., Stralen, van, M., Ren, B., Berendsen, F. F., Bosch, J. G. & Pluim, J. P. W., 2013, From Nano to Macro : IEEE 10th International Symposium on Biomedical Imaging (ISBI 2013), 7 - 11 April 2013, San Francisco, CA. Piscataway: Institute of Electrical and Electronics Engineers, p. 242-245

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)

Simultaneous segmentation of multiple heart cavities in 3D transesophageal echocardiograms

Haak, A., Vegas-Sanchez-Ferrero, G., Mulder, H. H., Kirisli, H. A., Baka, N., Metz, C., Klein, S., Ren, B., van Burken, G., Pluim, J. P. W., Steen, van der, A. F. W., Walsum, van, T. & Bosch, J. G., 2013, 2013 IEEE International Ultrasonics Symposium, IUS 2013, 21 July 2013 through 25 July 2013, Prague. Piscataway: Institute of Electrical and Electronics Engineers, p. 659-662

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

3 Citations (Scopus)
2012

Comparison of spatiotemporal interpolators for 4D image reconstruction from 2D transesophageal ultrasound

Haak, A., Stralen, van, M., van Burken, G., Klein, S., Pluim, J. P. W., Jong, de, N., Steen, van der, A. F. W. & Bosch, J. G., 2012, Medical Imaging 2012: Ultrasonic Imaging, Tomography, and Therapy, 5 February 2012 through 6 February 2012, San Diego, CA. Bosch, J. G. & Doly, M. M. (eds.). Washington: SPIE, 11 p. 832007. (Proceedings of SPIE; vol. 8320).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Citations (Scopus)

DIRBoost : an algorithm for boosting deformable image registration

Muenzing, S. E. A., Ginneken, van, B. & Pluim, J. P. W., 2012, 9th IEEE International Symposium on Biomedical Imaging : from Nano to Macro (ISBI 2012), May 2-5 2012, Barcelona, Spain. Piscataway: Institute of Electrical and Electronics Engineers, p. 1339-1342

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

4 Citations (Scopus)

Elastic demons : characterizing cortical development in neonates using an implicit surface registration

Pearlman, P. C., Išgum, I., Kersbergen, K. J., Benders, M. J. N. L., Viergever, M. A. & Pluim, J. P. W., 2012, 2nd International Workshop on Spatiotemporal Image Analysis for Longitudinal and Time-Series Image Data, STIA 2012. Durrleman, S. (ed.). Berlin: Springer, p. 38-49 (Lecture Notes in Computer Science; vol. 7570).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)

On combining algorithms for deformable image registration

Muenzing, S. E. A., Ginneken, van, B. & Pluim, J. P. W., 2012, 5th International Workshop on Biomedical Image Registration (WBIR 2012) 7 - 8 July 2012, Nashville, TN. Dawant, B. M. (ed.). Berlin: Springer, p. 256-265 (Lecture Notes in Computer Science; vol. 7359).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

7 Citations (Scopus)
1 Downloads (Pure)

Optimal kernel sizes for 4D image reconstruction using normalized convolution from sparse fast-rotating transesophageal 2D ultrasound images

Haak, A., Klein, S., van Burken, G., Jong, de, N., Steen, van der, A. F. W., Bosch, J. G., Stralen, van, M. & Pluim, J. P. W., 2012, 2012 IEEE International Ultrasonics Symposium, IUS 2012, 7 October 2012 through 10 October 2012, Dresden. Piscataway: Institute of Electrical and Electronics Engineers, p. 703-706

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Downloads (Pure)

Segmentation of cervical images by inter-subject registration with a statistical organ model

Berendsen, F. F., Heide, van der, U. A., Langerak, T. R., Kotte, A. N. T. J. & Pluim, J. P. W., 2012, Abdominal imaging : computational and clinical applications : Third International Workshop, Held in Conjunction with MICCAI 2011, Toronto, ON, Canada, September 18, 2011, revised selected papers. Yoshida, H., Sakas, G. & Linguraru, M. G. (eds.). Berlin: Springer, p. 240-247 (Lecture Notes in Computer Science; vol. 7029).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)
1 Downloads (Pure)

Segmentation of the cartilage in the rib cage in 3D MRI

Noorda, Y. H., Bartels, L. W. & Pluim, J. P. W., 2012, 4th International Workshop on Computational and Clinical Applications in Abdominal Imaging. Yoshida, H., Hawkes, D. & Vannier, M. W. (eds.). Berlin: Springer, p. 229-237 (Lecture Notes in Computer Science; vol. 7601).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

3 Citations (Scopus)
2011

Automatic segmentation of the prostate in 3D magnetic resonance images using case specific deformable models

Chandra, S., Dowling, J., Shen, K., Pluim, J. P. W., Greer, P., Salvado, O. & Fripp, J., 2011, Proceedings - 2011 International Conference on Digital Image Computing: Techniques and Applications, DICTA 2011, 6-8 December 2011, Noosa, Queensland . Piscataway: Institute of Electrical and Electronics Engineers, p. 7-12 6 p. 6128652

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

5 Citations (Scopus)

Evaluating and improving label fusion in atlas-based segmentation using the surface distance

Langerak, T. R., Heide, van der, U. A., Kotte, A. N. T. J., Berendsen, F. F. & Pluim, J. P. W., 2011, Medical Imaging 2011: Image Processing, 14 February 2011 through 16 February 2011, Lake Buena Vista, FL. Dawant, B. M. & Haynor, D. R. (eds.). Washington: SPIE, p. 796201-1/7 (Proceedings of SPIE; vol. 7962).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

6 Citations (Scopus)
1 Downloads (Pure)

Evaluation of optimization methods for intensity-based 2D-3D registration in x-ray guided interventions

Van Der Bom, I. M. J., Klein, S., Staring, M., Homan, R., Bartels, L. W. & Pluim, J. P. W., 2011, Medical imaging 2011: Image Processing, 14 - 16 February 2011, Lake Buena Vista, Florida. Dawant, B. M. & Haynor, D. R. (eds.). Bellingham: SPIE, p. 1-15 15 p. 796223. (Proceedings of SPIE; vol. 7962).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

18 Citations (Scopus)

Fast automatic multi-atlas segmentation of the prostate from 3D MR images

Dowling, J. A., Fripp, J., Chandra, S. S., Pluim, J. P. W., Lambert, J., Parker, J., Denham, J., Greer, P. B. & Salvado, O., 2011, Prostate cancer imaging : image analysis and image-guided interventions : International Workshop, Held in Conjunction with MICCAI 2011, Toronto, Canada, September 22, 2011. Proceedings. Madabhushi, A., Dowling, J., Huisman, H. & Barratt, D. (eds.). Berlin: Springer, p. 10-21 (Lecture Notes in Computer Science; vol. 6963).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

34 Citations (Scopus)
2 Downloads (Pure)

Intra-temporal facial nerve centerline segmentation for navigated temporal bone surgery

Voormolen, E. H. J., Stralen, van, M., Woerdeman, P. A., Pluim, J. P. W., Noordmans, H. J., Regli, L., Berkelbach van der Sprenkel, J. W. & Viergever, M. A., 2011, Medical Imaging 2011: Visualization, Image-Guided Procedures, and Modeling, 13 February 2011 through 15 February 2011, Lake Buena Vista, Florida. Wong, K. H. & Holmes III, D. R. (eds.). Washington: SPIE, p. 79641C-1/10 (Proceedings of SPIE; vol. 7964).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)
1 Downloads (Pure)

Label fusion in multi-atlas based segmentation with user-defined local weights

Langerak, T. R., Heide, van der, U. A., Kotte, A. N. T. J., Berendsen, F. F. & Pluim, J. P. W., 2011, Proceedings of the 8th IEEE International Symposium on Biomedical Imaging : From Nano to Macro ( ISBI'11), 30 March 2011 through 2 April 2011, Chicago, IL. Piscataway: Institute of Electrical and Electronics Engineers, p. 1480-1483

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Citations (Scopus)

Local atlas selection and performance estimation in multi-atlas based segmentation

Langerak, T. R., Heide, van der, U. A., Kotte, A. N. T. J., Berendsen, F. F. & Pluim, J. P. W., 2011, Proceedings of the 8th IEEE International Symposium on Biomedical Imaging : From Nano to Macro (ISBI'11), 30 March - 2 April 2011, Chicago, USA. Piscataway: Institute of Electrical and Electronics Engineers, p. 669-672

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5 Citations (Scopus)

Marker-controlled watershed segmentation of nuclei in H&E stained breast cancer biopsy images

Veta, M., Huisman, A., Viergever, M. A., Diest, van, P. J. & Pluim, J. P. W., 2011, Proceedings of the 8th IEEE International Symposium on Biomedical Imaging : From Nano to Macro ( ISBI'11), 30 March 2011 through 2 April 2011, Chicago, IL. Piscataway: Institute of Electrical and Electronics Engineers, p. 618-621

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47 Citations (Scopus)
12 Downloads (Pure)

Preconditioned stochastic gradient descent optimisation for monomodal image registration

Klein, S., Staring, M., Andersson, J. P. & Pluim, J. P. W., 2011, Medical image computing and computer-assisted intervention (MICCAI 2011) 18 - 22 September 2011, Toronto, Canada.. Fichtinger, G., Martel, A. & Peters, T. (eds.). Berlin: Springer, Vol. 2. p. 549-556 (Lecture Notes in Computer Science; vol. 6892).

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10 Citations (Scopus)