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Research Output

2019

Fourier transform on the homogeneous space of 3D positions and orientations for exact solutions to linear PDEs

Duits, R., Bekkers, E. J. & Mashtakov, A., 8 Jan 2019, In : Entropy. 21, 1, 38 p., 38.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
36 Downloads (Pure)

Vascular biomarkers for diabetes and diabetic retinopathy screening

Huang, F., Abbasi-Sureshjani, S., Zhang, J., Bekkers, E. J., Dasht Bozorg, B. & ter Haar Romeny, B. M., 22 Nov 2019, Computational Retinal Image Analysis: Tools, Applications and Perspectives. Trucco, E., MacGillivray, T. & Xu, Y. (eds.). Academic Press Inc., p. 319-352 34 p.

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

2018

Design and processing of invertible orientation scores of 3D images

Janssen, M. H. J., Janssen, A. J. E. M., Bekkers, E. J., Bescós, J. O. & Duits, R., 1 Nov 2018, In : Journal of Mathematical Imaging and Vision. 60, 9, p. 1427–1458 32 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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7 Citations (Scopus)
49 Downloads (Pure)

Nilpotent approximations of sub-Riemannian distances for fast perceptual grouping of blood vessels in 2D and 3D

Bekkers, E. J., Chen, D. & Portegies, J. M., 1 Jul 2018, In : Journal of Mathematical Imaging and Vision. 60, 6, p. 882-899 18 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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2 Citations (Scopus)
106 Downloads (Pure)

Reconnection of interrupted curvilinear structures via cortically inspired completion for ophthalmologic images

Zhang, J., Bekkers, E., Chen, D., Berendschot, T. T. J. M., Schouten, J., Pluim, J. P. W., Shi, Y., Dashtbozorg, B. & Romeny, B. M. T. H., 1 May 2018, In : IEEE Transactions on Biomedical Engineering. 65, 5, p. 1151-1165 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)
File
98 Downloads (Pure)

Roto-translation covariant convolutional networks for medical image analysis

Bekkers, E. J., Lafarge, M. W., Veta, M., Eppenhof, K. A. J., Pluim, J. P. W. & Duits, R., 1 Jan 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Schnabel, J. A., Davatzikos, C., Alberola-López, C., Fichtinger, G. & Frangi, A. F. (eds.). Cham: Springer, p. 440-448 9 p. (Lecture Notes in Computer Science; vol. 11070).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

10 Citations (Scopus)

Template matching via densities on the roto-translation group

Bekkers, E., Loog, M., Romeny, B. T. H. & Duits, R., 1 Feb 2018, In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 40, 2, p. 452-466 15 p., 7864477.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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5 Citations (Scopus)
74 Downloads (Pure)
2017

Retinal image analysis using sub-Riemannian geometry in SE(2)

Bekkers, E. J., 23 Jan 2017, Eindhoven: Technische Universiteit Eindhoven. 348 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

Open Access
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770 Downloads (Pure)

Retinal vessel delineation using a brain-inspired wavelet transform and random forest

Zhang, J., Chen, Y., Bekkers, E., Wang, M., Dashtbozorg, B. & Romeny, B. M. T. H., 1 Sep 2017, In : Pattern Recognition. 69, p. 107-123 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

30 Citations (Scopus)

Sub-Riemannian geodesics in SO(3) with application to vessel tracking in spherical images of retina

Mashtakov, A. P., Duits, R., Sachkov, Y. L., Bekkers, E. J. & Beschastnyi, I. Y., Mar 2017, In : Doklady Mathematics. 95, 2, p. 168-171

Research output: Contribution to journalArticleAcademicpeer-review

The hessian of axially symmetric functions on SE(3) and application in 3D image analysis

Janssen, M. H. J., Dela Haije, T. C. J., Martin, F. C., Bekkers, E. J. & Duits, R., 2017, Scale Space and Variational Methods in Computer Vision: 6th International Conference, SSVM 2017, Kolding, Denmark, June 4-8, 2017, Proceedings. Lauze, F., Dong, Y. & Bjorholm Dahl, A. (eds.). Dordrecht: Springer, p. 643-655 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10302 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Citations (Scopus)

Tracking of lines in spherical images via sub-Riemannian geodesics in SO(3)

Mashtakov, A., Duits, R., Sachkov, Y., Bekkers, E. J. & Beschastnyi, I., 2017, In : Journal of Mathematical Imaging and Vision. 58, 2, p. 239–264 26 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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8 Citations (Scopus)
44 Downloads (Pure)

Vessel tracking via sub-riemannian geodesics on the projective line bundle

Bekkers, E. J., Duits, R., Mashtakov, A. & Sachkov, Y., 2017, Geometric Science of Information : Third International Conference, GSI, 2017 Paris, France, November 7-9, 2017: proceedings. Nielsen, F. & Barbaresco, F. (eds.). Cham: Springer, p. 773-781 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10589 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

1 Citation (Scopus)
1 Downloads (Pure)
2016

Automatic detection of vascular bifurcations and crossings in retinal images using orientation scores

Abbasi-Sureshjani, S., Smit-Ockeloen, I. M., Bekkers, E. J., Dashtbozorg, B. & ter Haar Romeny, B. M., 2016, Proceedings of the 13th IEEE International Symposium on Biomedical Imaging (ISBI), April 13-16 2016, Prague, Czech Republic. Piscataway: Institute of Electrical and Electronics Engineers, p. 189-192 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

14 Citations (Scopus)
3 Downloads (Pure)

Brain-inspired algorithms for retinal image analysis

ter Haar Romeny, B. M., Bekkers, E. J., Zhang, J., Abbasi-Sureshjani, S., Huang, F., Duits, R., Dasht Bozorg, B., Berendschot, T. T. J. M., Smit-Ockeloen, I., Eppenhof, K. A. J., Feng, J., Hannink, J., Schouten, J., Tong, M., Wu, H., van Triest, J. W., Zhu, S., Chen, D., He, W., Xu, L. & 2 others, Han, P. & Kang, Y., Nov 2016, In : Machine Vision and Applications. 27, 8, p. 1117–1135 19 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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13 Citations (Scopus)
423 Downloads (Pure)

Infrastructure for retinal image analysis

Dashtbozorg, B., Abbasi-Sureshjani, S., Zhang, J., Huang, F., Bekkers, E. J. & ter Haar Romenij, B. M., 2016, Proceedings of the Ophthalmic Medical Image Analysis Third International Workshop (OMIA 2016) Held in Conjunction with MICCAI 2016. Chen, X., Garvin, M. K., Liu, J., Trucco, E. & Xu, Y. (eds.). p. 105-112 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
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70 Downloads (Pure)
Open Access
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16 Citations (Scopus)
77 Downloads (Pure)

Robust retinal vessel segmentation via locally adaptive derivative frames in orientation scores

Zhang, J., Dashtbozorg, B., Bekkers, E., Pluim, J. P. W., Duits, R. & ter Haar Romeny, B. M., Nov 2016, In : IEEE Transactions on Medical Imaging. 35, 12, p. 2631-2644 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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91 Citations (Scopus)
311 Downloads (Pure)
2015

A PDE approach to data-driven sub-Riemannian geodesics in SE(2)

Bekkers, E. J., Duits, R., Mashtakov, A. & Sanguinetti, G. R., 1 Dec 2015, In : SIAM Journal on Imaging Sciences. 8, 4, p. 2740-2770 31 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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25 Citations (Scopus)
254 Downloads (Pure)

Curvature based biomarkers for diabetic retinopathy via exponential curve fits in SE (2)

Bekkers, E. J., Zhang, J., Duits, R. & ter Haar Romeny, B. M., Oct 2015, Proceedings of the Ophthalmic Medical Image Analysis : Third International Workshop (OMIA 2016) Held in Conjunction with MICCAI 2016, 9-13 October 2016, Munich, Germany. Chen, X., Garvin, M. K., Liu, J., Trucco, E. & Xu, Y. (eds.). p. 113-120

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
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52 Downloads (Pure)

Data-driven sub-Riemannian geodesics in SE(2)

Bekkers, E. J., Duits, R., Mashtakov, A. & Sanguinetti, G. R., 2015, Scale Space and Variational Methods in Computer Vision (5th International Conference, SSVM 2015, Lège-Cap Ferret, France, May 31-June 4, 2015, Proceedings). Aujol, J-F., Nikolova, M. & Papadakis, N. (eds.). Springer, p. 613-625 (Lecture Notes in Computer Science; vol. 9087).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

6 Citations (Scopus)
1 Downloads (Pure)

Retinal artery/vein classification via graph cut optimization

Eppenhof, K. A. J., Bekkers, E. J., Berendschot, T. T. J. M., Pluim, J. P. W. & ter Haar Romenij, B. M., 2015, Proceedings of the Ophthalmic Medical Image Analysis Second International Workshop, OMIA 2015. Chen, X., Garvin, M. K., Liu, J., Trucco, E. & Xu, Y. (eds.). p. 121-128

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
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79 Downloads (Pure)

Robust and fast vessel segmentation via Gaussian derivatives in orientation scores

Zhang, J., Bekkers, E., Abbasi-Sureshjani, S., Dashtbozorg, B. & ter Haar Romeny, B. M., 2015, Image Analysis and Processing — ICIAP 2015: 18th International Conference, Genoa, Italy, September 7-11, 2015, Proceedings, Part 1. Murino, V. & Puppo, E. (eds.). Berlin: Springer, p. 537-547 11 p. (Lecture Notes in Computer Science; vol. 9279).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

15 Citations (Scopus)
4 Downloads (Pure)

Stability analysis of fractal dimension in retinal vasculature

Huang, F., Zhang, J., Bekkers, E. J., Dashtbozorg, B. & ter Haar Romenij, B. M., 2015, Proceedings of the Ophthalmic Medical Image Analysis Second International Workshop, OMIA 2015 Held in Conjunction with MICCAI 2015, 9 October 2015, Munich, Germany. s.l.: s.n., p. 1-8

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Sub-Riemannian fast marching in SE(2)

Sanguinetti, G., Bekkers, E., Duits, R., Janssen, M. H. J., Mashtakov, A. & Mirebeau, J-M., 25 Oct 2015, Progress in Pattern Recognition, Image Analysis, Computer Vision, and Applications : 20th Iberoamerican Congress, CIARP 2015, Montevideo, Uruguay, November 9-12, 2015 : Proceedings. Pardo, A. & Kittler, J. (eds.). Cham: Springer, p. 366-374 8 p. (Lecture Notes in Computer Science (LNCS); vol. 9423).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

13 Citations (Scopus)

Training of templates for object recognition in invertible orientation scores : application to optic nerve head detection in retinal images

Bekkers, E. J., Duits, R. & Loog, M., 2015, Energy Minimization Methods in Computer Vision and Pattern Recognition (10th International Conference, EMMCVPR 2015, Hong Kong, China, January 13-16, 2015. Proceedings). Tai, X. C., Bae, E., Chan, T. F. & Lysaker, M. (eds.). Berlin: Springer, p. 464-477 (Lecture Notes in Computer Science; vol. 8932).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

4 Citations (Scopus)
2014

A multi-orientation analysis approach to retinal vessel tracking

Bekkers, E. J., Duits, R., Berendschot, T. T. J. M. & Haar Romeny, ter, B. M., 2014, In : Journal of Mathematical Imaging and Vision. 49, 3, p. 583-610

Research output: Contribution to journalArticleAcademicpeer-review

59 Citations (Scopus)
5 Downloads (Pure)

Crossing-preserving multi-scale vesselness

Hannink, J., Duits, R. & Bekkers, E. J., 2014, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2014 (17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part II). Golland, P., Hata, N., Barillot, C., Hornegger, J. & Howe, R. (eds.). Cham: Springer, p. 603-610 (Lecture Notes in Computer Science; vol. 8674).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

12 Citations (Scopus)

Optic nerve head detection via group correlations in multi-orientation transforms

Bekkers, E. J., Duits, R. & Haar Romeny, ter, B. M., 2014, Image Analysis and Recognition (11th International Conference, ICIAR 2014, Vilamoura, Portugal, October 22-24, 2014, Proceedings, Part II). Campilho, A. & Kamel, M. (eds.). Cham: Springer, p. 293-302 (Lecture Notes in Computer Science; vol. 8815).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

5 Citations (Scopus)
1 Downloads (Pure)

Vesselness via multiple scale orientation scores

Hannink, J., Duits, R. & Bekkers, E. J., 2014, s.n. 9 p. (arXiv; vol. 1402.4963 [cs.CV])

Research output: Book/ReportReportAcademic

Open Access
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306 Downloads (Pure)
2012

A new retinal vessel tracking method based on orientation scores

Bekkers, E. J., Duits, R., Haar Romeny, ter, B. M. & Berendschot, T. T. J. M., 2012, s.n. 27 p. (arXiv.org; vol. 1212.3530 [cs.CV])

Research output: Book/ReportReportAcademic

3 Downloads (Pure)