• Groene Loper, Building 15, Gemini-South 2.106, Secretary Rina van Dijck-Postma

    5612 AZ Eindhoven

    Netherlands

Research Output

2015

Segmentation of multiple heart cavities in 3-D transesophageal ultrasound images

Haak, A., Vegas-Sanchez-Ferrero, G., Mulder, H. W., Ren, B., Kirisli, H. A., Metz, C., van Burken, G., van Stralen, M., Pluim, J. P. W., Steen, van der, A. F. W., Walsum, van, T. & Bosch, J. G., Jun 2015, In : IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control. 62, 6, p. 1179-1189

Research output: Contribution to journalArticleAcademicpeer-review

11 Citations (Scopus)
2 Downloads (Pure)

Stability analysis of fractal dimension in retinal vasculature

Huang, F., Zhang, J., Bekkers, E. J., Dashtbozorg, B. & ter Haar Romenij, B. M., 2015, Proceedings of the Ophthalmic Medical Image Analysis Second International Workshop, OMIA 2015 Held in Conjunction with MICCAI 2015, 9 October 2015, Munich, Germany. s.l.: s.n., p. 1-8

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Superintegrability of left-invariant sub-Riemannian structures on unimodular three-dimensional Lie groups

Mashtakov, A. P. & Sachkov, Y. L., 1 Nov 2015, In : Differential Equations. 51, 11, p. 1476-1483 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

7 Citations (Scopus)

The development of a 3D anatomical atlas of the pelvis: taking the next step in enhancing surgical anatomical education and clinical guidance

Kraima, A. C., Smit, N. N., Jansma, D., Eisemann, E., Park, H. S., Chung, M. S., West, N. P., Quirke, P., Rutten, H. J., Vilanova, A., Velde, C. J. H. V. D. & Deruiter, M. C., 2015, In : European Journal of Cancer. 51, 3, p. S357 1 p., 2087.

Research output: Contribution to journalMeeting AbstractAcademic

Open Access
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14 Downloads (Pure)

The influence of construction methodology on structural brain network measures: a review

Qi, S., Meesters, S., Nicolay, K., ter Haar Romeny, B. M. & Ossenblok, P., 30 Sep 2015, In : Journal of Neuroscience Methods. 253, p. 170-182

Research output: Contribution to journalArticleAcademicpeer-review

27 Citations (Scopus)
2 Downloads (Pure)

Towards quantification of the brain’s sheet structure in diffusion MRI data

Tax, C. M. W., Dela Haije, T. C. J., Fuster, A., Duits, R., Viergever, M. A., Calabrese, E., Johnson, G. A., Florack, L. M. J. & Leemans, A., 2015, Proceedings of the International Biomedical and Astronomical Signal Processing (BASP) Frontiers workshop January 25 - 30, 2015, Villars-sur-Ollon, Switzerland. Wiaux, Y., McEwen, J. & Lustig, M. (eds.). p. 74

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademic

Open Access
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146 Downloads (Pure)

Training of templates for object recognition in invertible orientation scores : application to optic nerve head detection in retinal images

Bekkers, E. J., Duits, R. & Loog, M., 2015, Energy Minimization Methods in Computer Vision and Pattern Recognition (10th International Conference, EMMCVPR 2015, Hong Kong, China, January 13-16, 2015. Proceedings). Tai, X. C., Bae, E., Chan, T. F. & Lysaker, M. (eds.). Berlin: Springer, p. 464-477 (Lecture Notes in Computer Science; vol. 8932).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

4 Citations (Scopus)

Visual analytics for the exploration of multiparametric cancer imaging

Raidou, R-G., Moreira, M. P., van Empt, W., Breeuwer, M. & Vilanova Bartroli, A., 2015, 2014 IEEE Conference on Visual Analytics Science and Technology, 9-14 October 2014, Paris, France . Chen, M., Ebert, D. & North, C. (eds.). Piscataway: Institute of Electrical and Electronics Engineers, p. 263-264

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

3 Citations (Scopus)
1 Downloads (Pure)

Visual analytics for the exploration of tumor tissue characteristics

Raidou, R. G., Heide, U. A. V. D., Dinh, C., Ghobadi, G., Kallehauge, J. F., Breeuwer, M. & Vilanova, A., 2015, In : Computer Graphics Forum. 34, 3, p. 11-20 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Visual analytics for the exploration of tumor tissue characterization

Raidou, R. G., van der Heide, U., Dinh, C. V., Ghobadi, G., Kallehauge, J. F., Breeuwer, M. & Vilanova Bartroli, A., 2015, In : Computer Graphics Forum. 34, 3, p. 11-20

Research output: Contribution to journalArticleAcademicpeer-review

14 Citations (Scopus)
2 Downloads (Pure)
2014

4D MRI flow coupled to physics-based fluid simulation for blood-flow visualization

de Hoon, N. H. L. C., Pelt, van, R. F. P., Jalba, A. C. & Vilanova, A., 2014, In : Computer Graphics Forum. 33, 3, p. 121-130 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

6 Citations (Scopus)
5 Downloads (Pure)

62. The virtual surgical pelvis: a highly-detailed 3D pelvic model for anatomical education and surgical simulation

Kraima, A. C., Smit, N. N., Jansma, D., West, N. P., Quirke, P., Rutten, H. J., Vilanova, A., Velde, C. J. H. V. D. & DeRuiter, M. C., 1 Nov 2014, In : European Journal of Surgical Oncology. 40, 11, p. S32 1 p.

Research output: Contribution to journalArticleAcademic

Accelerated self-gated UTE MRI of the murine heart

Motaal, A. G., Noorman, N., Graaf, de, W. L., Florack, L. M. J., Nicolay, K. & Strijkers, G. J., 2014, Medical Imaging 2014 : Biomedical Applications in Molecular, Structural, and Functional Imaging (San Diego California, February 16-18, 2014). Molthen, R. C. & Weaver, J. B. (eds.). SPIE, p. 903803-1/8 (Proceedings of SPIE; vol. 9038).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

3 Downloads (Pure)

A geometric model for the functional circuits of the visual front-end

ter Haar Romeny, B. M., 2014, Brain-Inspired Computing: International Workshop, BrainComp 2013, Cetraro, Italy, July 8-11, 2013, Revised Selected Papers. Grandinetti, L., Lippert, T. & Petkov, N. (eds.). Cham: Springer, p. 35-50 16 p. (Lecture Notes in Computer Science; vol. 8603).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

A multi-orientation analysis approach to retinal vessel tracking

Bekkers, E. J., Duits, R., Berendschot, T. T. J. M. & Haar Romeny, ter, B. M., 2014, In : Journal of Mathematical Imaging and Vision. 49, 3, p. 583-610

Research output: Contribution to journalArticleAcademicpeer-review

62 Citations (Scopus)
5 Downloads (Pure)

An automatic graph-based approach for artery/vein classification in retinal images

Dashtbozorg, B., Mendonca, A. M. & Campilho, A., 1 Mar 2014, In : IEEE Transactions on Image Processing. 23, 3, p. 1073-1083

Research output: Contribution to journalArticleAcademicpeer-review

97 Citations (Scopus)

A new modified histogram matching normalization for time series microarray analysis

Astola, L. J. & Molenaar, J., 2014, In : Microarrays. 3, 3, p. 203-211 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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85 Downloads (Pure)

A novel Riemannian metric for geodesic tractography in DTI

Fuster, A., Tristán-Vega, A., Dela Haije, T. C. J., Westin, C-F. & Florack, L. M. J., 2014, Computational Diffusion MRI and Brain Connectivity (MICCAI Workshop, Nagoya, Japan, September 22, 2013). Schultz, T., Venkataraman, A., O'Donnell, L. & Panagiotaki, E. (eds.). Berlin: Springer, p. 97-104 (Mathematics and Visualization).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

12 Citations (Scopus)
1 Downloads (Pure)

A simplified algorithm for inverting higher order diffusion tensors

Astola, L., Sepasian, N., Dela Haije, T., Fuster, A. & Florack, L., 1 Dec 2014, In : Axioms. 3, 4, p. 369-379 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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111 Downloads (Pure)

Association fields via cuspless sub-Riemannian geodesics in SE(2)

Duits, R., Boscain, U., Rossi, F. & Sachkov, Y., 2014, In : Journal of Mathematical Imaging and Vision. 49, 2, p. 384-417

Research output: Contribution to journalArticleAcademicpeer-review

23 Citations (Scopus)

Bone reposition planning for corrective surgery using statistical shape model : assessment of differential geometrical features

Sepasian, N., Van de Giessen, M., Dobbe, I. & Streekstra, G., 2014, Bayesian and graphical models for biomedical imaging : First International Workshop, BAMBI 2014, Cambridge, MA, USA, September 18, 2014, Revised Selected Papers. Cardoso, M. J., Simpson, I. & Arbel, T. (eds.). Berlin: Springer, p. 49-60 (Lecture Notes in Computer Science; vol. 8677).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

5 Citations (Scopus)

Breast cancer histopathology image analysis

Veta, M., 2014, Utrecht: Utrecht University. 131 p.

Research output: ThesisPhd Thesis 4 Research NOT TU/e / Graduation NOT TU/e)

23 Downloads (Pure)

Breast cancer histopathology image analysis : a review

Veta, M., Pluim, J. P. W., Diest, van, P. J. & Viergever, M. A., 2014, In : IEEE Transactions on Biomedical Engineering. 61, 5, p. 1400-1411 1400.

Research output: Contribution to journalArticleAcademicpeer-review

271 Citations (Scopus)
8 Downloads (Pure)

Canonical coordinates for retino-cortical magnification

Florack, L. M. J., 2014, Eindhoven: Technische Universiteit Eindhoven. 12 p. (CASA-report; vol. 1405)

Research output: Book/ReportReportAcademic

Open Access
File
66 Downloads (Pure)

Characterization of blood-flow patterns from phase-contrast MRI velocity fields

Pelt, van, R. F. P., Fuster, A., Claassen, G. G. H. & Vilanova, A., 2014, Eurographics Conference on Visualization (EuroVis'14, Swansea, Wales, UK, June 9-13, 2014) : Short Papers. Elmqvist, N., Hlawitschka, M. & Kennedy, J. (eds.). The Eurographics Association, p. 1-5

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

17 Citations (Scopus)
1 Downloads (Pure)

CMR reference values for left ventricular volumes, mass, and ejection fraction using computer-aided analysis: The Framingham Heart Study

Chuang, M. L., Gona, P., Hautvast, G. L. T. F., Salton, C. J., Breeuwer, M., O'Donnell, C. J. & Manning, W. J., Apr 2014, In : Journal of Magnetic Resonance Imaging. 39, 4, p. 895-900 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

27 Citations (Scopus)

Coregistration of preoperative computed tomography and intraoperative three-dimensional rotational X-ray images for cochlear implant surgical evaluation

Pearlman, P. C., Deurzen, van, M. H. W., Pluim, J. P. W. & Grolman, W., 2014, In : Otology & Neurotology. 35, 10, p. 1759-1764

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
2 Citations (Scopus)
350 Downloads (Pure)

Corrections to "Breast cancer histopathology image analysis": a review [May 14 1400-1411]

Veta, M., Pluim, J. P. W., Diest, van, P. J. & Viergever, M. A., Nov 2014, In : IEEE Transactions on Biomedical Engineering. 61, 11, p. 2819-2819 1 p.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)
2 Downloads (Pure)

Crossing-preserving multi-scale vesselness

Hannink, J., Duits, R. & Bekkers, E. J., 2014, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2014 (17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part II). Golland, P., Hata, N., Barillot, C., Hornegger, J. & Howe, R. (eds.). Cham: Springer, p. 603-610 (Lecture Notes in Computer Science; vol. 8674).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

12 Citations (Scopus)

Cuspless sub-Riemannian geodesics within the Euclidean motion group SE(d)

Duits, R., Ghosh, A., Dela Haije, T. C. J. & Sachkov, Y., 2014, Neuromathematics of Vision. Citti, G. & Sarti, A. (eds.). Berlin: Springer, p. 173-215 (Lecture Notes in Morphogenesis).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademic

Determination of physiological parameters of tissue from dynamic contrast-enhanced MR data

Breeuwer, M., Mischi, M. & Wijkstra, H., 9 Oct 2014, Patent No. WO2014162246 A1, Priority date 3 Apr 2013, Priority No. US201361807806P

Research output: PatentPatent publication

Open Access
File
33 Downloads (Pure)

DIRBoost : an algorithm for boosting deformable image registration : application to lung CT intra-subject registration

Muenzing, S. E. A., Ginneken, van, B., Viergever, M. A. & Pluim, J. P. W., 2014, In : Medical Image Analysis. 18, 3, p. 449-459 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

19 Citations (Scopus)
2 Downloads (Pure)

Direct myocardial strain assessment from frequency estimation in tagging MRI

Kause, H. B., Filatova, O., Duits, R., Bruurmijn, L. C. M., Fuster, A., Westenberg, J. J. M., Florack, L. M. J. & Assen, van, H. C., 2014, Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges (4th International Workshop, STACOM'13, held in conjunction with MICCAI'13, Nagoya, Japan, September 26, 2013. Revised Selected Papers). Camara, O., Mansi, T., Pop, M., Rhode, K., Sermesant, M. & Young, A. (eds.). Berlin: Springer, p. 212-219 (Lecture Notes in Computer Science; vol. 8330).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Citations (Scopus)
4 Downloads (Pure)

Dissimilarity-based ensembles for multiple instance learning

Cheplygina, V., Tax, D. M. J. & Loog, M., 2014, s.n. 12 p. (arXiv; vol. 1402.1349 [stat.ML])

Research output: Book/ReportReportAcademic

Open Access
File
81 Downloads (Pure)

Effects of tracer arrival time on the accuracy of high-resolution (Voxel-Wise) myocardial perfusion maps from contrast-enhanced first-pass perfusion magnetic resonance

Zarinabad, N., Hautvast, G. L. T. F., Sammut, E., Arujuna, A., Breeuwer, M., Nagel, E. & Chiribiri, A., 2014, In : IEEE Transactions on Biomedical Engineering. 61, 9, p. 2499-2506 8 p., 6813677.

Research output: Contribution to journalArticleAcademicpeer-review

10 Citations (Scopus)

Evaluating contextual processing in diffusion MRI : application to optic radiation reconstruction for epilepsy surgery

Tax, C. M. W., Duits, R., Vilanova, A., Haar Romenij, ter, B. M., Hofman, P. A. M., Wagner, L., Leemans, A. & Ossenblok, P. P. W., 2014, In : PLoS ONE. 9, 7, p. 101524/1-19

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
15 Citations (Scopus)
245 Downloads (Pure)

Fast multiatlas selection using composition of transformations for radiation therapy planning

Rivest-Hénault, D., Ghose, S., Pluim, J. P. W., Greer, P. B., Fripp, J. & Dowling, J. A., 2014, Medical Computer Vision : Algorithms for Big Data: International Workshop, MCV 2014, Held in Conjunction with MICCAI 2014, Cambridge, Massachusetts, USA, September 18, 2014, Revised Selected Papers. Menze, B., Langs, G., Montillo, A., Kelm, M., Mueller, H., Zhang, S., Cai, W. & Metaxas, D. (eds.). Berlin: Springer, p. 105-115 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8848).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Citations (Scopus)

Fuzzy fibers: uncertainty in dMRI tractography

Schultz, T., Vilanova, A., Brecheisen, R. & Kindlmann, G., 1 Jan 2014, Scientific visualization: uncertainty, multifield, biomedical, and scalable visualization. Hansen, C. D., Chen, M., Johnson, C. R., Kaufman, A. E. & Hagen, H. (eds.). London: Springer, p. 79-92 14 p. (Mathematics and Visualization).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

5 Citations (Scopus)

Higher-order tensors in diffusion imaging

Schultz, T., Fuster, A., Ghosh, A., Deriche, R., Florack, L. M. J. & Lim, L. H., 2014, Visualization and Processing of Tensors and Higher Order Descriptors for Multi-Valued Data, Part III. Westin, C-F., Vilanova, A. & Burgeth, B. (eds.). Springer, p. 129-161 (Mathematics and Visualization).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademic

14 Citations (Scopus)
4 Downloads (Pure)

Learning-based approaches to deformable image registration

Münzing, S. E. A., 2014, Utrecht: Utrecht University. 119 p.

Research output: ThesisPhd Thesis 4 Research NOT TU/e / Graduation NOT TU/e)

Liver perfusion in dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) : comparison of enhancement in Gd-BT-DO3A and Gd-EOB-DTPA in normal liver parenchyma

Schalkx, H. J., Stralen, van, M., Coenegrachts, K., Bosch, van den, M. A. A. J., Kessel, van, C. S., Hillegersberg, van, R., Erpecum, van, K. J., Verkooijen, H. M., Pluim, J. P. W., Veldhuis, W. B. & Leeuwen, van, M. S., 2014, In : European Radiology. 24, 9, p. 2146-2156 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

11 Citations (Scopus)
2 Downloads (Pure)

Magnetic resonance dispersion imaging for localization of angiogenesis and cancer growth

Mischi, M., Turco, S., Lavini, C., Kompatsiari, K., Rosette, de la, J. J. M. C. H., Breeuwer, M. & Wijkstra, H., 2014, In : Investigative Radiology. 49, 8, p. 561-569

Research output: Contribution to journalArticleAcademicpeer-review

23 Citations (Scopus)
8 Downloads (Pure)

Magnetic resonance dispersion imaging for quantitative assessment of angiogenesis in prostate cancer

Turco, S., Lavini, C., Breeuwer, M., Rosette, de la, J. J. M. C. H., Engelbrecht, M., Wijkstra, H. & Mischi, M., 2014.

Research output: Contribution to conferencePosterAcademic

2 Downloads (Pure)

Metabolomics reveals organ-specific metabolic rearrangements during early tomato seedling development

Gomez-Roldan, M. V., Engel, B., Vos, de, R. C. H., Vereijken, P., Astola, L. J., Groenenboom, M., Geest, van de, H., Bovy, A., Molenaar, J., Eeuwijk, van, F. A. & Hall, R. D., 2014, In : Metabolomics. 10, 5, p. 958-974 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
15 Citations (Scopus)
179 Downloads (Pure)

Multimodality infarct identification for optimal image-guided intramyocardial cell injections

van Slochteren, F. J., van Es, R., Koudstaal, S., Spoel, van der, T. I. G., Sluijter, J. P. G., Verbree, J., Pruim, R. H. R., Pluim, J., Leiner, T., Doevendans, P. A. & Chamuleau, S. A. J., Nov 2014, In : Netherlands Heart Journal. 22, 11, p. 493-500 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
5 Citations (Scopus)
78 Downloads (Pure)

Myocardial blood flow quantification from MRI - an image analysis perspective

Zarinabad, N., Chiribiri, A. & Breeuwer, M., 2014, In : Current Cardiovascular Imaging Reports. 7, 1, p. 1-9 9 p.

Research output: Contribution to journalReview articleAcademicpeer-review

4 Citations (Scopus)

Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach

Meyer, P., Cokelaer, T., Chandran, D., Kim, K. H., Loh, P-R., Tucker, G., Lipson, M., Berger, B., Kreutz, C., Raue, A., Steiert, B., Timmer, J., Bilal, E., Sauro, H. M., Stolovitzky, G., Saez-Rodriguez, J. & Astola, L. J., 2014, In : BMC Systems Biology. 8, p. 13-1/18

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
43 Citations (Scopus)
262 Downloads (Pure)

Numerical approaches for linear left-invariant diffusions on SE(2), their comparison to exact solutions, and their applications in retinal imaging

Zhang, J., Duits, R., Sanguinetti, G. R. & Haar Romeny, ter, B. M., 2014, s.n. 36 p. (arXiv; vol. 1403.3320 [math.NA])

Research output: Book/ReportReportAcademic

Open Access
File
71 Downloads (Pure)

Opsporen van diabetes met netvlies laserscans

Haar Romeny, ter, B. M., 2014, Het beste idee van 2014. Baijens, J. A. (ed.). Tilburg: De Wereld, p. 113-114 309 p.

Research output: Chapter in Book/Report/Conference proceedingChapterPopular

1 Downloads (Pure)

Optic nerve head detection via group correlations in multi-orientation transforms

Bekkers, E. J., Duits, R. & Haar Romeny, ter, B. M., 2014, Image Analysis and Recognition (11th International Conference, ICIAR 2014, Vilamoura, Portugal, October 22-24, 2014, Proceedings, Part II). Campilho, A. & Kamel, M. (eds.). Cham: Springer, p. 293-302 (Lecture Notes in Computer Science; vol. 8815).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

5 Citations (Scopus)
1 Downloads (Pure)