ICMS Core member

2025

Local existence and uniqueness of solutions to the time-dependent Kohn–Sham equations coupled with classical nuclear dynamics

Baumeier, B., Çaylak, O., Mercuri, C., Peletier, M., Prokert, G. & Scharpach, W. (Corresponding author), 15 Jan 2025, In: Journal of Mathematical Analysis and Applications. 541, 2, 33 p., 128688.

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2024

14-3-3 Protein-Protein Interactions: From Mechanistic Understanding to Their Small-Molecule Stabilization

Somsen, B. A., Cossar, P. J., Arkin, M. R., Brunsveld, L. & Ottmann, C. (Corresponding author), 15 Jul 2024, In: ChemBioChem. 25, 14, 14 p., e202400214.

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14-3-3τ as a Modulator of Early α-Synuclein Multimerization and Amyloid Formation

Heesink, G., van den Oetelaar, M. C. M., Semerdzhiev, S. A., Ottmann, C., Brunsveld, L., Blum, C. (Corresponding author) & Claessens, M. M. A. E. (Corresponding author), 1 May 2024, In: ACS Chemical Neuroscience. 15, 9, p. 1926-1936 11 p.

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3D visualization reveals the cooling rate dependent crystallization near a wall in dense microgel systems

Schelling, M. P. M., Verouden, T. W. J., Stevens, T. C. M. & Meijer, J. M. (Corresponding author), 28 Aug 2024, In: Soft Matter. 20, 32, p. 6343-6352 10 p.

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A call for caution when using network methods to study multimorbidity: an illustration using data from the Canadian Longitudinal Study on Aging

Griffith, L. E. (Corresponding author), Brini, A., Muniz-Terrera, G., St. John, P. D., Stirland, L. E., Mayhew, A., Oyarzún, D. & van den Heuvel, E., Aug 2024, In: Journal of Clinical Epidemiology. 172, 11 p., 111435.

Research output: Contribution to journal › Article › Academic › peer-review

Accurate and fast modeling of opto-electronic processes in organic light-emitting diodes: From master equation to multiverse kinetic Monte Carlo modeling

Taherpour, M., 8 Feb 2024, Eindhoven: Eindhoven University of Technology. 203 p.

Research output: Thesis › Phd Thesis 1 (Research TU/e / Graduation TU/e)

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A Cell Pre-Wrapping Seeding Technique for Hydrogel-Based Tubular Organ-On-A-Chip

Nie, J., Lou, S., Pollet, A. M. A. O., van Vegchel, M., Bouten, C. V. C. & den Toonder, J. M. J. (Corresponding author), 14 Aug 2024, In: Advanced Science. 11, 30, 15 p., 2400970.

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A Change in Perspective through Process Convergence for Complex Stochastic Processes: Why small can define large and large can define small

Gündlach, R.C.-M., 15 Oct 2024, (Accepted/In press) Eindhoven: Eindhoven University of Technology. 321 p.

Research output: Thesis › Phd Thesis 1 (Research TU/e / Graduation TU/e)

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A community challenge to predict clinical outcomes after immune checkpoint blockade in non-small cell lung cancer

Mason, M., Lapuente-Santana, Ó., Halkola, A. S., Wang, W., Mall, R., Xiao, X., Kaufman, J., Fu, J., Pfeil, J., Banerjee, J., Chung, V., Chang, H., Chasalow, S. D., Lin, H. Y., Chai, R., Yu, T., Finotello, F., Mirtti, T., Mäyränpää, M. I. & Bao, J. & 25 others, Verschuren, E. W., Ahmed, E. I., Ceccarelli, M., Miller, L. D., Monaco, G., Hendrickx, W. R. L., Sherif, S., Yang, L., Tang, M., Gu, S. S., Zhang, W., Zhang, Y., Zeng, Z., Das Sahu, A., Liu, Y., Yang, W., Bedognetti, D., Tang, J., Eduati, F., Laajala, T. D., Geese, W. J., Guinney, J., Szustakowski, J. D., Vincent, B. G. & Carbone, D. P. (Corresponding author), 21 Feb 2024, In: Journal of Translational Medicine. 22, 1, 16 p., 190.

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1 Citation (Scopus)

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Adapting cryogenic correlative light and electron microscopy (cryo-CLEM) for food oxidation studies

Yang, S., Takeuchi, M., Joosten, R. R. M., van Duynhoven, J. P. M. (Corresponding author), Friedrich, H. (Corresponding author) & Hohlbein, J. (Corresponding author), Apr 2024, In: Food Structure. 40, 10 p., 100365.

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1 Citation (Scopus)

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A Dirichlet process mixture regression model for the analysis of competing risk events

Ungolo, F. (Corresponding author) & van den Heuvel, E. R., May 2024, In: Insurance: Mathematics and Economics. 116, p. 95-113 19 p.

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Advanced optical imaging for the rational design of nanomedicines

Ortiz-Perez, A., Zhang, M., Fitzpatrick, L. W., Izquierdo-Lozano, C. & Albertazzi, L. (Corresponding author), Jan 2024, In: Advanced Drug Delivery Reviews. 204, 19 p., 115138.

Research output: Contribution to journal › Review article › peer-review

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5 Citations (Scopus)

85 Downloads (Pure)

Advancing Artificial Cells with Functional Compartmentalized Polymeric Systems - In Honor of Wolfgang Meier

Palivan, C. G. (Corresponding author), Heuberger, L., Gaitzsch, J., Voit, B., Appelhans, D., Borges Fernandes, B., Battaglia, G., Du, J., Abdelmohsen, L., van Hest, J. C. M., Hu, J., Liu, S., Zhong, Z., Sun, H., Mutschler, A. & Lecommandoux, S. (Corresponding author), 9 Sept 2024, In: Biomacromolecules. 25, 9, p. 5454-5467 14 p.

Research output: Contribution to journal › Review article › peer-review

Advancing interactive systems with liquid crystal network-based adaptive electronics

Lyu, P., Broer, D. J. & Liu, D. (Corresponding author), 17 May 2024, In: Nature Communications. 15, 1, 9 p., 4191.

Research output: Contribution to journal › Article › Academic › peer-review

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3 Citations (Scopus)

30 Downloads (Pure)

Aerogel-To-Sol-To-Aerogel (ASA) Process for Recycling, Repairing, Reprogramming of High Performance Organic Aerogels

Wang, C.-L., Eisenreich, F. & Tomović, Ž. (Corresponding author), 10 Jul 2024, In: Advanced Functional Materials. 34, 28, 8 p., 2314447.

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1 Citation (Scopus)

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A Generic Antibody-Blocking Protein That Enables pH-Switchable Activation of Antibody Activity

Biewenga, L., Vermathen, R., Rosier, B. J. H. M. & Merkx, M. (Corresponding author), 19 Jan 2024, In: ACS Chemical Biology. 19, 1, p. 48-57 10 p.

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2 Citations (Scopus)

70 Downloads (Pure)

Agent-based modeling of the prostate tumor microenvironment uncovers spatial tumor growth constraints and immunomodulatory properties

van Genderen, M. N. G., Kneppers, J., Zaalberg, A., Bekers, E. M., Bergman, A. M. (Corresponding author), Zwart, W. (Corresponding author) & Eduati, F. (Corresponding author), 21 Feb 2024, In: npj Systems Biology and Applications. 10, 1, 13 p., 20.

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A golden key to microseconds: Plasmon-Enhanced Single-Molecule Fluorescence for Ultrafast Biomolecular Dynamics

Nooteboom, S. W., 9 Apr 2024, Eindhoven: Eindhoven University of Technology. 136 p.

Research output: Thesis › Phd Thesis 1 (Research TU/e / Graduation TU/e)

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Alternative Synthesis Technology for Ultra Low Colour Rosin-Based Products

Vujović, B., 27 Feb 2024, Eindhoven: Technische Universiteit Eindhoven. 94 p.

Research output: Thesis › EngD Thesis

A modular organic neuromorphic spiking circuit for retina-inspired sensory coding and neurotransmitter-mediated neural pathways

Matrone, G. M. (Corresponding author), van Doremaele, E. R. W., Surendran, A., Laswick, Z., Griggs, S., Ye, G., McCulloch, I., Santoro, F., Rivnay, J. & van de Burgt, Y. (Corresponding author), 3 Apr 2024, In: Nature Communications. 15, 1, 9 p., 2868.

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2 Citations (Scopus)

41 Downloads (Pure)

Analysis of sampled-data hybrid integrator-gain systems: A discrete-time approach

Sharif, B. (Corresponding author), Alferink, D., Heertjes, M., Nijmeijer, H. & Heemels, M., Sept 2024, In: Automatica. 167, 13 p., 111765.

Research output: Contribution to journal › Article › Academic › peer-review

A New Polymeric Minimally Invasive Glaucoma Implant

Pereira, I. C. F., Bartels, P. A. A., Bertens, C. J. F., Söntjens, S. H. M., Wyss, H. M., Schenning, A. P. H. J., Dankers, P. Y. W., Beckers, H. J. M. & den Toonder, J. M. J. (Corresponding author), 6 May 2024, In: Advanced Materials Technologies. 9, 9, 10 p., 2301686.

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An Offset Patterned Cross-β Structure in Assemblies of C₃-Symmetric Peptide Amphiphiles

Zagorodko, O. (Corresponding author), Melnyk, T., Nebot, V. J., Dankers, P. Y. W. & Vicent, M. J. (Corresponding author), 1 Feb 2024, In: Chemistry - A European Journal. 30, 7, p. e202303194 9 p., e202303194.

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1 Citation (Scopus)

21 Downloads (Pure)

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10 Citations (Scopus)

54 Downloads (Pure)

Artificial cells with viscoadaptive behavior based on hydrogel-loaded giant unilamellar vesicles

Llopis-Lorente, A., Schotman, M. J. G., Humeniuk, H. V., van Hest, J. C. M. (Corresponding author), Dankers, P. Y. W. (Corresponding author) & Abdelmohsen, L. K. E. A. (Corresponding author), 14 Jan 2024, In: Chemical Science. 15, 2, p. 629-638 10 p.

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2 Citations (Scopus)

72 Downloads (Pure)

A Systematic Study on the Physicochemical Interactions Between Polymeric Micelles and Mucin: Toward the Development of Optimal Drug Delivery Nanocarriers

Tollemeto, M. (Corresponding author), Badillo-Ramírez, I., Thamdrup, L. H. E., Li, Y., Ghavami, M., Patiño Padial, T., Christensen, J. B., van Hest, J. & Boisen, A., 5 Jul 2024, In: Advanced Materials Interfaces. 11, 19, 12 p., 2400107.

Research output: Contribution to journal › Article › Academic › peer-review

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A Systems Approach to Study Collagen Type I Self-Assembly: Kinetics and Morphology

Vena, M. P., van Hazendonk, L. S., van Zyl, W., Tuinier, R. & Friedrich, H. (Corresponding author), 19 Jul 2024, In: Small Methods. 8, 7, 12 p., 2301171.

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1 Citation (Scopus)

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A variable clustering approach for overdispersed high-dimensional count data using a copula-based mixture model

Brini, A. (Corresponding author), Manju, A. & van den Heuvel, E. R., 2024, (Accepted/In press) In: Communications in Statistics: Simulation and Computation. XX, X

Research output: Contribution to journal › Article › Academic › peer-review

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A Versatile Benzimidazole- Substituted Spirolactam Mechanophore: When Excited State Intramolecular Proton Transfer Couples with Rhodamine

Hu, H., Cheng, X., Ma, Z., Yang, Q., Sijbesma, R. P. & Ma, Z. (Corresponding author), 1 Jul 2024, In: CCS Chemistry. 6, 7, p. 1798-1809 12 p.

Research output: Contribution to journal › Article › Academic › peer-review

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2 Citations (Scopus)

16 Downloads (Pure)

Axial–Equatorial Halide Ordering in Layered Hybrid Perovskites from Isotropic–Anisotropic ²⁰⁷Pb NMR

Hope, M. A., Cordova, M., Mishra, A., Gunes, U., Caiazzo, A., Datta, K., Janssen, R. A. J. & Emsley, L. (Corresponding author), 22 Mar 2024, In: Angewandte Chemie - International Edition. 63, 13, 10 p., e202314856.

Research output: Contribution to journal › Article › Academic › peer-review

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2 Citations (Scopus)

31 Downloads (Pure)

Balancing Scaffold Degradation and Neo-tissue Formation in In-situ Tissue Engineered Vascular Grafts

Uiterwijk, M., Coolen, B., van Rijswijk, J.-W., Söntjens, S., van Houtem, M., Szymczyk, W., Rijns, L., Janssen, H., van der Wal, A., de Mol, B., Bouten, C., Strijkers, G., Dankers, P. & Kluin, J. (Corresponding author), Aug 2024, In: Tissue engineering. Part A. 30, 15-16, p. 421-436 16 p.

Research output: Contribution to journal › Article › Academic › peer-review

Baricitinib and tofacitinib off-target profile, with a focus on Alzheimer's disease

Faquetti, M. L., Slappendel, L., Bigonne, H., Grisoni, F., Schneider, P., Aichinger, G., Schneider, G., Sturla, S. J. & Burden, A. M. (Corresponding author), 1 Jan 2024, In: Alzheimer's and Dementia: Translational Research & Clinical Interventions. 10, 1, 8 p., e12445.

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1 Citation (Scopus)

48 Downloads (Pure)

Bias of the additive hazard model in the presence of causal effect heterogeneity

Post, R. A. J. (Corresponding author), van den Heuvel, E. R. & Putter, H., Apr 2024, In: Lifetime Data Analysis. 30, 2, p. 383-403 21 p.

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1 Citation (Scopus)

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Bio-inspired multimodal learning with organic neuromorphic electronics for behavioral conditioning in robotics

Krauhausen, I., Griggs, S., McCulloch, I., den Toonder, J. M. J., Gkoupidenis, P. (Corresponding author) & van de Burgt, Y. (Corresponding author), Dec 2024, In: Nature Communications. 15, 9 p., 4765.

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1 Citation (Scopus)

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Bioluminescent detection of viral surface proteins using branched multivalent protein switches

Gräwe, A., Spruit, C. M., de Vries, R. P. & Merkx, M. (Corresponding author), 1 Feb 2024, In: RSC Chemical Biology. 5, 2, p. 148-157 10 p.

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Bioluminescent Intercalating Dyes for Ratiometric Nucleic Acid Detection

de Stigter, Y., van der Veer, H. J., Rosier, B. J. H. M. & Merkx, M. (Corresponding author), 16 Feb 2024, In: ACS Chemical Biology. 19, 2, p. 575-583 9 p.

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Biomolecular condensates with complex architectures via controlled nucleation

Erkamp, N., Verwiel, M. A. M., Qian, D., Sneideris, T., Spaepen, F., Weitz, D., van Hest, J. C. M. (Corresponding author) & Knowles, T. (Corresponding author), Jun 2024, In: Nature Chemical Engineering. 1, 6, p. 430-439 23 p.

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Biomolecular interactions on densely coated nanoparticles: a single-molecule perspective

Dey, S. (Corresponding author), Rivas-Barbosa, R., Sciortino, F., Zaccarelli, E. & Zijlstra, P. (Corresponding author), 1 Mar 2024, In: Nanoscale. 16, 9, p. 4872-4879 8 p.

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1 Citation (Scopus)

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Bisurea-Based Supramolecular Polymers for Tunable Biomaterials

Vleugels, M. E. J., Bosman, R., da Camino Soligo, P. H., Wijker, S., Fehér, B., Spiering, A. J. H., Rijns, L., Bellan, R., Dankers, P. Y. W. & Palmans, A. R. A. (Corresponding author), 26 Jan 2024, In: Chemistry : A European Journal. 30, 6, 10 p., e202303361.

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1 Citation (Scopus)

46 Downloads (Pure)

Blood compatible supramolecular coatings for soft materials

Bartels, P. A. A., 7 May 2024, Eindhoven: Eindhoven University of Technology. 184 p.

Research output: Thesis › Phd Thesis 1 (Research TU/e / Graduation TU/e)

10 Downloads (Pure)

Brain-Inspired Organic Electronics: Merging Neuromorphic Computing and Bioelectronics Using Conductive Polymers

Krauhausen, I., Coen, C.-T., Spolaor, S. (Corresponding author), Gkoupidenis, P. (Corresponding author) & van de Burgt, Y. B. (Corresponding author), 10 Apr 2024, In: Advanced Functional Materials. 34, 15, 30 p., 2307729.

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12 Citations (Scopus)

26 Downloads (Pure)

Cancer-on-chip models for metastasis: importance of the tumor microenvironment

Jouy Bar, M., de Winde, C. M., Wolf, K., Friedl, P., Mebius, R. & den Toonder, J. M. J. (Corresponding author), Apr 2024, In: Trends in Biotechnology. 42, 4, p. 431-448 18 p.

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5 Citations (Scopus)

82 Downloads (Pure)

Can macrophage polarization be an early indicator of outcome after ACL reconstruction

Spierings, J. M. H., Geomini, L. D., Buenen, M., van der Steen, M. C., Janssen, R. P. A., Ito, K. & Foolen, J., 2024.

Research output: Contribution to conference › Poster

Can structure predict function at individual level in the human connectome?

Smolders, L. (Corresponding author), De Baene, W., Rutten, G. J., van der Hofstad, R. & Florack, L., Jun 2024, In: Brain Structure and Function. 229, 5, p. 1209-1223 15 p.

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Cartilage-derived cells display heterogeneous pericellular matrix synthesis in agarose microgels

van Mourik, M., Tiemeijer, B. M., van Zon, M., Abinzano, F., Tel, J., Foolen, J. & Ito, K. (Corresponding author), Aug 2024, In: Matrix Biology Plus. 23, 11 p., 100157.

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