Department of Biomedical Engineering

Research Output

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2020

Fast contour propagation for MR-guided prostate radiotherapy using CNNs

Eppenhof, K. A. J., Maspero, M., Savenije, M. H. F., de Boer, J. C. J., van der Voort van Zyp, J. R. N., Raaymakers, B. W., Raaijmakers, A., Veta, M., Pluim, J. P. W. & van den Berg, C. A. T., 15 Jan 2020, (Accepted/In press).

Research output: Contribution to conferenceAbstractAcademic

2019

Cross-scanner and cross-protocol harmonisation of multi-shell diffusion MRI data: open challenge and evaluation results

Ning, L., Bonet-Carne, E., Grussu, F., Sepehrband, F., Kaden, E., Veraart, J., Blumberg, S. B., Khoo, C. S., Palombo, M., Coll-Font, J., Scherrer, B., Warfield, S. K., Karayumak, S. C., Rathi, Y., Koppers, S., Weninger, L., Ebert, J., Merhof, D., Moyer, D., Pietsch, M. & 11 others, Christiaens, D., Teixeira, R., Tournier, J-D., Zhylka, A., Pluim, J., Parker, G., Rudrapatna, U., Evans, J., Charron, C., Jones, D. K. & Tax, C. W. M., 2019. 4 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access

Monitoring bone remodeling in a humanized 3D osteoblast-osteoclast co-culture

Remmers, S., Ito, K., Hofmann, S., Melke, J. & Mayer, D., Nov 2019.

Research output: Contribution to conferenceAbstractAcademic

On fiber orientation distribution peak selection for diffusion MRI fiber tractography

Zhylka, A., Leemans, A., Pluim, J. & De Luca, A., 1 Sep 2019, p. 14. 1 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access
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28 Downloads (Pure)

Serum deprivation counteracts phenotypic drift of tendon cells

van Vijven, M., Wunderli, S., Ito, K., Snedeker, J. & Foolen, J., 10 Jul 2019. 1 p.

Research output: Contribution to conferenceAbstractAcademic

2018

Emergence of a geometrical and mechanical equilibrium in tissue-engineered heart valves?

van Kelle, A. J., Janssen - van den Broek, W. J. T., Lopata, R. G. P., Loerakker, S. & Bouten, C. V. C., 12 Apr 2018. 1 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access
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61 Downloads (Pure)

Training deep convolutional neural networks for deformable image registration of pulmonary CT images

Eppenhof, K., Lafarge, M. & Pluim, J., 28 Jun 2018.

Research output: Contribution to conferenceAbstractAcademic

2 Downloads (Pure)
2017

A biologically motivated computational model to explain anisotropic prestretch in the mitral valve

van Kelle, A. J., Rausch, M., Bouten, C. V. C., Kuhl, E. & Loerakker, S., 2 Jul 2017.

Research output: Contribution to conferenceAbstractAcademic

A fast homogenized finite element approach for distal radius strength calculations from HRpQCT images

Arias Moreno, A. J., Hosseini, H. S., Ito, K., Zysset, P. K. & van Rietbergen, B., 26 Jun 2017.

Research output: Contribution to conferenceAbstractAcademic

Open Access
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51 Downloads (Pure)

A novel bioreactor to study the driving mechanical stimuli of tissue growth and remodeling

van Kelle, A. J., Oomen, P. J. A., Janssen - van den Broek, W. J. T., Lopata, R. G. P., Rutten, M. C. M., Loerakker, S. & Bouten, C. V. C., 21 Jun 2017.

Research output: Contribution to conferenceAbstractAcademic

Dissecting the cell heterogeneity of skin in inflammatory dermatological conditions through deconvolution of tissue expression profiles

Felix Garza, Z. C., Lenz, M., Liebmann, J., Born, M., Arts, I., Hilbers, P. A. J. & van Riel, N. A. W., 2017.

Research output: Contribution to conferenceAbstractAcademic

Gene expression-based cellular profiling of skin in health and inflammatory dermatological conditions

Felix Garza, Z. C., Lenz, M., Liebmann, J., Born, M., Arts, I. C. W., Hilbers, P. A. J. & van Riel, N. A. W., 2017. 1 p.

Research output: Contribution to conferenceAbstractAcademic

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109 Downloads (Pure)

Lessons learned from computer models on blue light therapy for psoriasis vulgaris

Felix Garza, Z. C., Liebmann, J., Born, M., Hilbers, P. A. J. & van Riel, N. A. W., 2017, p. 101-102.

Research output: Contribution to conferenceAbstractAcademic

Open Access
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26 Downloads (Pure)

The effect of Bariatric surgery on VLDL metabolism

Yildirim, V. & van Riel, N. A. W., 2017, (Unpublished).

Research output: Contribution to conferenceAbstractAcademic

2016

Bioactive glass can potentially reinforce large bone defects

van Gestel, N. A. P., Hulsen, D. J. W., Arts, J. J. C., Geurts, J. A. P., Ito, K. & van Rietbergen, B., 30 Mar 2016. 1 p.

Research output: Contribution to conferenceAbstractAcademic

Fluid shear stress induces jagged1 Ligand clustering in endothelial cells.

Driessen, R. C. H., Bouten, C. V. C. & Sahlgren, C. M., 23 Jul 2016.

Research output: Contribution to conferenceAbstractAcademic

Geometric connectivity analysis based on edge co-occurrences in retinal images

Abbasi-Sureshjani, S., Zhang, J., Sanguinetti, G. R., Duits, R. & ter Haar Romenij, B. M., Oct 2016, p. 154–155. 2 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access
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64 Downloads (Pure)

Identification of growth seeds in preterm brain using Helmholtz decomposition: a longitudinal study

Pepe, A., Auzias, G., Dubois, J., Leroy, F., Claessens, N. H. P., Moeskops, P., Mangin, J-F., Išgum, I., Benders, M. J. N. L. & Lefevre, J., 2016.

Research output: Contribution to conferenceAbstractAcademic

Investigating pressure induced deep tissue injury uing MRI and 3D finite element analysis

Traa, W. A., van Turnhout, M. C., Nelissen, J., Strijkers, G. J., Nicolay, K., Bader, D. & Oomens, C. W. J., 28 Jul 2016. 2 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access
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63 Downloads (Pure)

Mapping cortical development from morphology to microstructure: a longitudinal study in preterms

Zomeno, M., Lefevre, J., Leroy, F., Germanaud, D., Kersbergen, K. J., Moeskops, P., Claessens, N. H. P., Poupon, C., Išgum, I., Mangin, J-F., Benders, M. J. N. L., Dubois, J. & Lebenberg, J., 2016, p. 4226. 6 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access
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162 Downloads (Pure)

Mechanical properties of bioactive glass putty formulations

van Gestel, N. A. P., Geurts, J. A. P., Hulsen, D. J. W., Hofmann, S., Ito, K., van Rietbergen, B. & Arts, J. J. C., 30 Mar 2016. 1 p.

Research output: Contribution to conferenceAbstractAcademic

Modelling blue light treatment of inflammatory skin conditions to optimize the therapeutic approach.

Felix Garza, Z. C., van den Biggelaar, E. P. F., Liebmann, J., Born, M., Hilbers, P. A. J., van Riel, N. A. W. & Hoekstra, A. G. (ed.), 2016.

Research output: Contribution to conferenceAbstractAcademic

Oxytocin in saliva as a biological marker during Kangaroo care, a feasibility study

Kommers, D. R., Broeren, M. A. C., Oei, S. G., Feijs, L. M. G., Andriessen, P. & Bambang Oetomo, S., 2016.

Research output: Contribution to conferenceAbstractAcademic

Predicting the response of keratinocytes to damage of the epidermal barrier in atopic dermatitis

Felix Garza, Z. C., van den Biggelaar, E. P. F., Liebmann, J., Born, M., Hilbers, P. A. J. & van Riel, N. A. W., 28 Feb 2016.

Research output: Contribution to conferenceAbstractAcademic

Open Access
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46 Downloads (Pure)

RetinaCheck : an interactive platform for retinal image analysis

Dashtbozorg, B., Zhang, J., Huang, F. & ter Haar Romenij, B. M., 2016.

Research output: Contribution to conferenceAbstractAcademic

3 Downloads (Pure)
2015

Bone resorption 'in-a-dish'

Remmers, S. J. A., Ito, K. & Hofmann, S., 3 Dec 2015.

Research output: Contribution to conferenceAbstractAcademic

2 Downloads (Pure)

Construction requirements for full-term newborn simulation manikin

Thielen, M. W. H., Bovendeerd, P. H. M. (ed.), Neto Fonseca, L. T. & van der Hout-van der Jagt, M. B. (ed.), 23 Apr 2015.

Research output: Contribution to conferenceAbstractAcademic

Open Access
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86 Downloads (Pure)

Discoidin domain receptor-1 : a novel molecular switch regulating fibrocalcific response in vascular smooth muscle cells

Krohn, J. B., Hutcheson, J. D., Martinez-Martinez, E., Bouten, C. V. C., Bendeck, M. P. & Aikawa, E., 10 Nov 2015.

Research output: Contribution to conferenceAbstractAcademic

Engineered cardiac microtissue model reveals no detrimental effect of fibrosis on beating frequency

van Spreeuwel, A. C., Bax, N. A., Chen, C. S. & Bouten, C. V. C., 1 Sep 2015, p. S223.

Research output: Contribution to conferenceAbstractAcademic

Open Access
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49 Downloads (Pure)

Non-invasive monitoring of pressure ulcer formation

Traa, W. A., Bader, D. L. & Oomens, C. W. J., 16 Sep 2015.

Research output: Contribution to conferenceAbstractAcademic

2014

Loss of collagen orientation heterogeneity in moderately degenerated human intervertebral discs

Rijsbergen, van, M. M., Dittmar, R. & Ito, K., 2014.

Research output: Contribution to conferenceAbstractAcademic

2 Downloads (Pure)

Mechanical competence of fractured and healing bone assessed by high resolution pQCT and micro-finite element analysis

van Rietbergen, B., de Jong, J. J. A., Arias Moreno, A. J., Van den Bergh, J. P., Arts, J. J. C. & Ito, K., 6 Jul 2014. 1 p.

Research output: Contribution to conferenceAbstractAcademic

MRI and 3D FEA based investigation of deep tissue injury in rat tibialis anterior muscle

Traa, W. A., Nelissen, J. L. & Moerman, K. M., 27 Aug 2014.

Research output: Contribution to conferenceAbstractAcademic

2013

Long range transport of colloids in aqueous solutions

Florea, D., Musa, S., Huyghe, J. M. R. J. & Wyss, H. M., 1 Mar 2013.

Research output: Contribution to conferenceAbstractAcademic

The compressive stiffness of fractured bone is overpredicted by microfinite element analysis

Arias Moreno, A. J., Ito, K. & van Rietbergen, B., 24 Oct 2013. 1 p.

Research output: Contribution to conferenceAbstractAcademic

2008

The volumetric bull's eye plot

Termeer, M. A., Bescos, J. O., Breeuwer, M., Vilanova, A., Gerritsen, F. A. & Groeller, M. E., 2008. 3 p.

Research output: Contribution to conferenceAbstractAcademic