Department of Biomedical Engineering

Research Output 1962 2020

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2019
1 Downloads (Pure)

A computational approach on sensitivity of left ventricular wall strains to geometry

Barbarotta, L. & Bovendeerd, P., 2019, Functional Imaging and Modeling of the Heart - 10th International Conference, FIMH 2019, Proceedings. Coudière, Y., Ozenne, V., Vigmond, E. & Zemzemi, N. (eds.). Cham: Springer Nature Switzerland AG, p. 240-248 9 p. (Lecture Notes in Computer Science ; vol. 11504).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Mode Shape
Atlas
Finite Element Model
Principal Component Analysis
Mechanics
9 Downloads (Pure)

Approximation of a pipeline of unsupervised retina image analysis methods with a CNN

Heslinga, F., Pluim, J., Dasht Bozorg, B., Berendschot, T., Houben, A. J. H. M., Henry, R. M. A. & Veta, M., 1 Mar 2019, Image Processing: SPIE Medical Imaging, 2019, San Diego, California, United States. Angelini, E. D. & Landman, B. A. (eds.). Bellingham: SPIE, 7 p. 109491N. (Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
File
Biomarkers
Image analysis
Pipelines
Neural networks
Medical problems

A simple multi-scale model to evaluate left ventricular growth laws

Rondanina, E. & Bovendeerd, P., 2019, Functional Imaging and Modeling of the Heart - 10th International Conference, FIMH 2019, Proceedings. Zemzemi, N., Coudière, Y., Ozenne, V. & Vigmond, E. (eds.). Cham: Springer Nature Switzerland AG, p. 249-257 9 p. (Lecture Notes in Computer Science; vol. 11504).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Blood

Automatic cardiac landmark localization by a recurrent neural network

van Zon, M., Veta, M. & Li, S., 1 Jan 2019, Medical Imaging 2019: Image Processing. Landman, B. A. & Angelini, E. D. (eds.). Bellingham: SPIE, 13 p. 1094916. (Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

landmarks
Recurrent neural networks
Mitral Valve
Magnetic Resonance Spectroscopy
Magnetic resonance

Convolutional neural network-based regression for quantification of brain characteristics using MRI

Fernandes, J., Alves, V., Khalili, N., Benders, M. J. N. L., Išgum, I., Pluim, J. & Moeskops, P., 30 Mar 2019, New Knowledge in Information Systems and Technologies. Reis, L. P., Costanzo, S., Adeli, H. & Rocha, Á. (eds.). Berlin: Springer, Vol. 2. p. 577-586 10 p. (Advances in Intelligent Systems and Computing; vol. 931).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Magnetic resonance imaging
Brain
Neural networks
Rats
Tissue
4 Downloads (Pure)

Convolutional neural networks for segmentation of the left atrium from gadolinium-enhancement MRI images

de Vente, C., Veta, M., Razeghi, O., Niederer, S., Pluim, J., Rhode, K. & Karim, R., 14 Feb 2019, Statistical Atlases and Computational Models of the Heart. Atrial Segmentation and LV Quantification Challenges - 9th International Workshop, STACOM 2018, Held in Conjunction with MICCAI 2018, Revised Selected Papers. McLeod, K., Mansi, T., Young, A., Rhode, K., Zhao, J., Li, S., Pop, M. & Sermesant, M. (eds.). Cham: Springer, p. 348-356 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11395 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Gadolinium
Magnetic resonance
Convolution
Magnetic resonance imaging
Segmentation

Deep learning networks to segment and detect breast terminal duct lobular units, acini, and adipose tissue: a step toward the automated analysis of lobular involution as a marker for breast cancer risk

Onken, A., Wetstein, S., Pyle, M., Pluim, J., Schnitt, S., Baker, G., Collins, L., Tamimi, R., Veta, M. & Heng, Y., 2019, United States and Canadian Academy of Pathology (USCAP).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademic

Adipose Tissue
Breast
Learning
Breast Neoplasms
Physiological Phenomena
3 Downloads (Pure)

Design of an affinity based cytokine release system to temporally control macrophage behavior

Lurier, E., Smits, A., Bouten, C. V. C. & Spiller, K. L., 1 Jan 2019, Society for Biomaterials Annual Meeting and Exposition 2019: The Pinnacle of Biomaterials Innovation and Excellence - Transactions of the 42nd Annual Meeting. Muttenz: Swiss Society for Biomaterials, p. 49 1 p. (Transactions of the Annual Meeting of the Society for Biomaterials and the Annual International Biomaterials Symposium; vol. 40).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Behavior Control
Macrophages
Biotin
Streptavidin
Cytokines
5 Downloads (Pure)

Detection of acini in histopathology slides: towards automated prediction of breast cancer risk

Wetstein, S., Onken, A., Baker, G., Pyle, M., Pluim, J., Tamimi, R., Heng, Y. & Veta, M., 18 Mar 2019, Medical Imaging 2019: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). Bellingham, 7 p. 109560Q. (Proceedings of SPIE; vol. 10956).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Ducts
Labels
Masks
Health
Biomarkers

How accurately can we detect atrial fibrillation using Photoplethysmography data measured in daily life?

Eerikäinen, L. M., Bonomi, A. G., Schipper, F., Dekker, L. R. C., Vullings, R., de Morree, H. M. & Aarts, R. M., 11 Sep 2019, Computing in Cardiology 2019. p. 1-4 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Photoplethysmography
Atrial Fibrillation
Wrist
Electrocardiography
Sensitivity and Specificity
1 Downloads (Pure)

Intraplaque haemorrhage detection using single-wavelength PAI and singular value decomposition in the carotid artery

van Hees, R. P. M., Wu, M., van de Vosse, F. N., Lopata, R. G. P. & Rutten, M. C. M., 19 Jul 2019, Opto-Acoustic Methods and Applications in Biophotonics IV. Ntziachristos, V. & Zemp, R. (eds.). SPIE, 3 p. 110771M. (Proceedings of SPIE; vol. 11077).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

hemorrhages
Photoacoustic effect
Singular value decomposition
arteries
Carotid Arteries
1 Citation (Scopus)

Modeling cardiac growth: an alternative approach

van Osta, N. C. J., van der Donk, L., Rondanina, E. & Bovendeerd, P., 2019, Functional Imaging and Modeling of the Heart - 10th International Conference, FIMH 2019, Proceedings. Coudière, Y., Zemzemi, N., Ozenne, V. & Vigmond, E. (eds.). Cham: Springer Nature Switzerland AG, p. 258-265 8 p. (Lecture Notes in Computer Science; vol. 11504).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Growth
Homeless Youth
Mechanics
Hemodynamics
1 Citation (Scopus)
6 Downloads (Pure)

Muti-shell diffusion MRI harmonisation and enhancement challenge (MUSHAC): progress and results

Ning, L., Bonet-Carne, E., Grussu, F., Sepehrband, F., Kaden, E., Veraart, J., Blumberg, S. B., Khoo, C. S., Palombo, M., Coll-Font, J., Scherrer, B., Warfield, S. K., Karayumak, S. C., Rathi, Y., Koppers, S., Weninger, L., Ebert, J., Merhof, D., Moyer, D., Pietsch, M. & 11 others, Christiaens, D., Teixeira, R., Tournier, J-D., Zhylka, A., Pluim, J., Parker, G., Rudrapatna, U., Evans, J., Charron, C., Jones, D. K. & Tax, C. W. M., 2019, Computational Diffusion MRI: International MICCAI Workshop, Granada, Spain, September 2018. Ning, L., Tax, C. M. W., Grussu, F., Bonet-Carne, E. & Sepehrband, F. (eds.). 226249 ed. Cham: Springer, p. 217-224 8 p. (Mathematics and Visualization).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademic

Open Access
File
Magnetic resonance imaging
Computational methods
Neural networks
1 Citation (Scopus)
70 Downloads (Pure)

Progressively growing convolutional networks for end-to-end deformable image registration

Eppenhof, K., Lafarge, M. & Pluim, J., 15 Mar 2019, Medical Imaging 2019 Image Processing. Landman, B. A. & Angelini, E. D. (eds.). Bellingham: SPIE, 7 p. 109491C. (Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
File
Image registration
Neural networks
2018
1 Citation (Scopus)
1 Downloads (Pure)

Analysis of retinal vascular biomarkers for early detection of diabetes

Zhang, J., Dashtbozorg, B., Huang, F., Berendschot, T. T. J. M. & ter Haar Romeny, B. M., 1 Jan 2018, ViPIMAGE 2017: Proceedings of the VI ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing Porto, Portugal, October 18-20, 2017. Tavares, J. M. R. S. & Natal Jorge, R. M. (eds.). Cham: Springer, p. 811-817 7 p. (Lecture Notes in Computational Vision and Biomechanics; vol. 27).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Biomarkers
Medical problems
Fractal dimension
Statistical methods
Computer aided diagnosis
1 Citation (Scopus)
6 Downloads (Pure)

An enhanced approach to rule base simplification of first-order takagi-sugeno fuzzy inference systems

Fuchs, C. E. M., Wilbik, A. M., van Loon, S. L. M., Boer, A-K. & Kaymak, U., 2018, Advances in Fuzzy Logic and Technology 2017: Proceedings of: EUSFLAT- 2017 – The 10th Conference of the European Society for Fuzzy Logic and Technology, September 11-15, 2017, Warsaw, Poland IWIFSGN’2017 – The Sixteenth International Workshop on Intuitionistic Fuzzy Sets and Generalized Nets, September 13-15, 2017, Warsaw, Poland. Kacprzyk, J., Szmidt, E., Zadrożny, S., Atanassov, K. T. & Krawczak, M. (eds.). Dordrecht: Springer, Vol. 2. p. 92-103 12 p. (Advances in Intelligent Systems and Computing; vol. 642).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Fuzzy inference
Fuzzy rules
Membership functions
1 Citation (Scopus)

An improved U-net architecture for simultaneous arteriole and venule segmentation in fundus image

Xu, X., Tan, T. & Xu, F., 21 Aug 2018, Medical Image Understanding and Analysis - 22nd Conference, Proceedings. Nixon, M., Mahmoodi, S. & Zwiggelaar, R. (eds.). Cham: Springer, p. 333-340 8 p. (Communications in Computer and Information Science; vol. 894).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Segmentation
Vessel
Misclassification Rate
Error Propagation
Labels
3 Downloads (Pure)

A novel method to transfer porous PDMS membranes for high throughput Organ-on-Chip and Lab-on-Chip assembly

Quiros-Solano, W. F., Gaio, N., Silvestri, C., Arik, Y. B., Stassen, O. M. J. A., van der Meer, A. D., Bouten, C. V. C., van den Berg, A., Dekker, R. & Sarro, P. M., 24 Apr 2018, 2018 IEEE Micro Electro Mechanical Systems, MEMS 2018. Piscataway: Institute of Electrical and Electronics Engineers, p. 318-321 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Polydimethylsiloxane
organs
assembly
chips
Throughput
1 Citation (Scopus)

Automatic classification of focal liver lesions based on clinical DCE-MR and T2-weighted images: a feasibility study

Jansen, M. J. A., Kuijf, H. J. & Pluim, J. P. W., 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. Piscataway: Institute of Electrical and Electronics Engineers, p. 245-248 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

13 Citations (Scopus)
834 Downloads (Pure)

Deformable image registration using convolutional neural networks

Eppenhof, K. A. J., Lafarge, M. W., Moeskops, P., Veta, M. & Pluim, J. P. W., 15 Mar 2018, Medical Imaging 2018 Image Processing. Bellingham: SPIE, 6 p. 105740S. (Proceedings of SPIE; vol. 10574).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
File
Image registration
Parameterization
Neural networks
Three-Dimensional Imaging
parameterization

Engineering protein-based nanoparticle conjugates for nanomedicine applications

van Hest, J., Pille, J., Abdelghani, M., Timmermans, S., Vervoort, D. & Pretto, C., 19 Aug 2018, 256th National Meeting and Exposition of the American-Chemical-Society (ACS) - Nanoscience, Nanotechnology and Beyond .

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

3 Citations (Scopus)

Exploratory study on direct prediction of diabetes using deep residual networks

Abbasi-Sureshjani, S., Dashtbozorg, B., ter Haar Romeny, B. M. & Fleuret, F., 2018, VipIMAGE2017. Tavares, J. M. R. S. & Jorge, R. M. N. (eds.). Springer, Vol. 27. p. 797-802 6 p. (Lecture notes in computational vision and biomechanics; vol. 27).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Medical problems
Health
Glucose
Feature extraction
Image processing
3 Citations (Scopus)
1 Downloads (Pure)

Finding the optimal number of features based on mutual information

Chen, P., Wilbik, A., van Loon, S., Boer, A-K. & Kaymak, U., 2018, Advances in Fuzzy Logic and Technology 2017 - Proceedings of: EUSFLAT-2017 – The 10th Conference of the European Society for Fuzzy Logic and Technology, IWIFSGN’2017 – The 16th International Workshop on Intuitionistic Fuzzy Sets and Generalized Nets. Springer, Vol. 641. p. 477-486 10 p. (Advances in Intelligent Systems and Computing; vol. 641).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Feature extraction
Transparency
1 Citation (Scopus)

Fuzzy classification of bariatric post-surgery effectiveness

Arévalo, A., Pacheco, R., Salgado, C. M., van Loon, S., Boer, A. K., Vieira, S. M., Kaymak, U. & Sousa, J. M. C., 12 Oct 2018, 2018 IEEE International Conference on Fuzzy Systems, FUZZ 2018 - Proceedings. Piscataway: Institute of Electrical and Electronics Engineers, 8 p. 8491643

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Fuzzy Classification
Surgery
Predictors
Fuzzy Modeling
Receiver Operating Characteristic Curve

Inferring a third spatial dimension from 2D histological images

Lafarge, M. W., Pluim, J. P. W., Eppenhof, K. A. J., Moeskops, P. & Veta, M., 10 Jan 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. Piscataway: IEEE Computer Society, Vol. 2018-April. p. 586-589 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Tissue
Decomposition
Coloring Agents
Learning
Staining and Labeling

LABELS 2018 Preface

Sznitman, R., Cheplygina, V., Mateus, D., Maier-Hein, L., Granger, E., Jannin, P. & Trucco, E., 1 Jan 2018, Intravascular Imaging and Computer Assisted Stenting and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 7th Joint International Workshop, CVII-STENT 2018 and Third International Workshop, LABELS 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 16, 2018, Proceedings. Stoyanov, D., Taylor, Z., Balocco, S., Sznitman, R., Martel, A., Maier-Hein, L., Dong, L., Zahnd, G., Demerci, S., Albarqouni, S., Lee, S-L., Moriconi, S., Cheplygina, V., Mateus, D., Trucco, E., Granger, E. & Jannin, E. (eds.). Springer, p. IX (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11043).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Citations (Scopus)

Novel polyelectrolyte membranes for fuel and flow batteries: insights from simulations

Sengupta, S., Kritikos, G., Karatasos, K., Venkatnathan, A., Pant, R., Komarov, P. & Lyulin, A. V., 11 Jul 2018, 9th International Conference on Times of Polymers and Composites: From Aerospace to Nanotechnology. American Institute of Physics, 4 p. 020004. (AIP Conference Proceedings; vol. 1981, no. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

electric batteries
membranes
acids
hydration
simulation
2 Downloads (Pure)

On the interaction between feature selection and parameter determination in fuzzy modelling

Chen, P., Fuchs, C., Wilbik, A., Chan, T. M., van Loon, S., Boer, A. K., Lu, X., Scharnhorst, V. & Kaymak, U., 1 Jan 2018, Information Processing and Management of Uncertainty in Knowledge-Based Systems. Applications - 17th International Conference, IPMU 2018, Proceedings: 17th International Conference, IPMU 2018, Cádiz, Spain, June 11-15, 2018, Proceedings, Part III. Medina, J., Perfilieva, I. & Yager, R. R. (eds.). Dordrecht: Springer, p. 150-161 12 p. (Communications in Computer and Information Science; vol. 855).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Fuzzy Modeling
Feature Selection
Feature extraction
Interaction
Model
8 Citations (Scopus)

Roto-translation covariant convolutional networks for medical image analysis

Bekkers, E. J., Lafarge, M. W., Veta, M., Eppenhof, K. A. J., Pluim, J. P. W. & Duits, R., 1 Jan 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Schnabel, J. A., Davatzikos, C., Alberola-López, C., Fichtinger, G. & Frangi, A. F. (eds.). Cham: Springer, p. 440-448 9 p. (Lecture Notes in Computer Science; vol. 11070).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Medical Image Analysis
Image analysis
Neural networks
Convolution
Neural Networks
1 Citation (Scopus)

Validation study on retinal vessel caliber measurement technique

Huang, F., Dashtbozorg, B., Zhang, J., Yeung, A., Berendschot, T. T. J. M. & ter Haar Romeny, B. M., 1 Jan 2018, VipIMAGE 2017: Proceedings of the VI ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing Porto, Portugal, October 18-20, 2017. Tavares, J. M. R. S. & Natal Jorge, R. M. (eds.). Cham: Springer, p. 818-826 9 p. (Lecture Notes in Computational Vision and Biomechanics; vol. 27).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Medical problems
Optics
Cameras
2017
20 Downloads (Pure)

3D geometry assessment and wall stress analysis of carotid arteries using 2D US segmentation during a controlled sweep

De Ruijter, J., Hobelman, KH., Van De Vosse, F., Van Sambeek, M. R. H. M. & Lopata, R. G. P., 31 Oct 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. Brussels: IEEE Computer Society, 1 p. 8092545

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

stress analysis
arteries
vulnerability
geometry
surgeons
1 Citation (Scopus)

A comparative study towards the establishment of an automatic retinal vessel width measurement technique

Huang, F., Dasht Bozorg, B., Yeung, A. K. S., Zhang, J., Berendschot, T. J. M. & ter Haar Romeny, B. M., 2017, Fetal, infant and ophthalmic medical image analysis - International Workshop, FIFI 2017 and 4th International Workshop, OMIA 2017 Held in Conjunction with MICCAI 2017, Proceedings. Springer, p. 227-234 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10554 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Measurement Techniques
Vessel
Comparative Study
Active Contours
Software
24 Citations (Scopus)
2 Downloads (Pure)

Adversarial training and dilated convolutions for brain MRI segmentation

Moeskops, P., Veta, M., Lafarge, M. W., Eppenhof, K. A. J. & Pluim, J. P. W., 2017, Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support - 3rd International Workshop, DLMIA 2017 and 7th International Workshop, ML-CDS 2017 Held in Conjunction with MICCAI 2017, Proceedings. Springer, p. 56-64 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10553 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Convolution
Magnetic resonance imaging
Brain
Segmentation
Neural networks
1 Downloads (Pure)

Assessment of left bundle branch related strain dyssynchrony: a comparison with tagged MRI

Fixsen, L. S., de Lepper, A., van 't Veer, M., Strik, M., van Middendorp, L., van de Vosse, F. N., Prinzen, F., Houthuizen, P. & Lopata, R. G. P., 31 Oct 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. Brussels: IEEE Computer Society, 8092422

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

bundles
echocardiography
magnetic resonance
therapy
1 Citation (Scopus)

Automatic and semi-automatic approaches for arteriolar-to-venular computation in retinal photographs

Mendonça, A. M., Remeseiro, B., Dashtbozorg, B. & Campilho, A., 1 Mar 2017, Medical Imaging 2017 Computer-Aided Diagnosis, 13-16 February 2017, Orlando, Florida. Armato III, S. G. & Petrick, N. A. (eds.). SPIE, Vol. 1. 7 p. 101341L. (Proceedings of SPIE; vol. 10134)(Progress in Biomedical optics and Imaging; vol. 18, no. 48).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Optics
Processing
4 Citations (Scopus)

Automatic segmentation of the intracranial volume in fetal MR images

Khalili, N., Moeskops, P., Claessens, N. H. P., Scherpenzeel, S., Turk, E., de Heus, R., Benders, M. J. N. L., Viergever, M. A., Pluim, J. P. W. & Išgum, I., 2017, Fetal, Infant and Ophthalmic Medical Image Analysis - International Workshop, FIFI 2017 and 4th International Workshop, OMIA 2017 Held in Conjunction with MICCAI 2017, Proceedings. Springer, p. 42-51 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10554 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Segmentation
Imaging techniques
Brain
Imaging
Dice
4 Citations (Scopus)

Boosted exudate segmentation in retinal images using residual nets

Abbasi-Sureshjani, S., Dashtbozorg, B., ter Haar Romeny, B. M. & Fleuret, F., 1 Jan 2017, Fetal, Infant and Ophthalmic Medical Image Analysis - International Workshop, FIFI 2017 and 4th International Workshop, OMIA 2017 Held in Conjunction with MICCAI 2017, Proceedings. Cardoso, M. J. (ed.). Berlin: Springer, p. 210-218 9 p. (Lecture Notes in Computer Science; vol. 10554)(Image processing, computer vision, pattern recognition, and graphics; vol. 10554).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Importance sampling
Patch
Segmentation
Importance Sampling
Processing
1 Citation (Scopus)
1 Downloads (Pure)

Characterization of human carotid plaques using multi-wavelength photoacoustic imaging

Arabul, M. U., Heres, H. M., Rutten, M. C. M., Van Sambeek, M. R. H. M., Van De Vosse, F. N. & Lopata, R. G. P., 31 Oct 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. Brussels: IEEE Computer Society, 1 p. 8092077

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

arteriosclerosis
hemorrhages
arteries
caps
lipids

Comparative visualization for diffusion tensor imaging group study at multiple levels of detail

Zhang, C., Höllt, T., Caan, M., Eisemann, E. & Vilanova, A., 2017, Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM). New York: Association for Computing Machinery, Inc, p. 53-62

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Diffusion tensor imaging
Tensors
Visualization
Statistical methods
2 Citations (Scopus)
98 Downloads (Pure)

Crowdsourced emphysema assessment

Ørting, S. N., Cheplygina, V., Petersen, J., Thomsen, L. H., Wille, M. M. W. & de Bruijne, M., 2017, Intravascular Imaging and Computer Assisted Stenting, and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 6th Joint International Workshops, CVII-STENT 2017 and Second International Workshop, LABELS 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cham: Sprnger Verlag, p. 126-135 (Lecture Notes in Computer Science; vol. 10552).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
File
Pulmonary diseases
Computerized tomography
Labels
Costs
21 Citations (Scopus)
2 Downloads (Pure)

Domain-adversarial neural networks to address the appearance variability of histopathology images

Lafarge, M. W., Pluim, J. P. W., Eppenhof, K. A. J., Moeskops, P. & Veta, M., 2017, Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support - 3rd International Workshop, DLMIA 2017 and 7th International Workshop, ML-CDS 2017 Held in Conjunction with MICCAI 2017, Proceedings. Springer, p. 83-91 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10553 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Pathology
Image analysis
Neural Networks
Tissue
Color
2 Citations (Scopus)
2 Downloads (Pure)

Exploring the similarity of medical imaging classification problems

Cheplygina, V., Moeskops, P., Veta, M., Dashtbozorg, B. & Pluim, J. P. W., 2017, Intravascular Imaging and Computer Assisted Stenting, and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 6th Joint International Workshops, CVII-STENT 2017 and 2nd International Workshop, LABELS 2017 Held in Conjunction with MICCAI 2017, Proceedings. Cardoso, M. J., Arbel, T. & et. al. (eds.). Cham: Springer, p. 59-66 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10552 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Medical Imaging
Medical imaging
Classification Problems
Meta-learning
Medical Image Analysis

Finite element analysis of a new type of post dilatation balloon catheter in PCI

Qian, W., Qi, L., Xu, L., He, Y., Zhao, F. & Sun, Y., 2017, 5th international conference on Computational and Mathematical Biomedical Engineering, CMBE 2017. Nithiarasu, P. & Robertson, A. M. (eds.). CMBE, p. 876-879 (CMBE Online Proceedings Series; vol. 2017, no. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

From a user study to a valid claim: how to test your hypothesis and avoid common pitfalls

de Hoon, N., Eisemann, E. & Vilanova, A., 1 Jun 2017, EuroVis Workshop on Reproducibility, Verification, and Validation in Visualization (EuroRV3). Lawonn, K., Smit, N. & Cunningham, D. (eds.). New York: Association for Computing Machinery, Inc, p. 25-28 4 p. (EuroVis Workshop on Reproducibility, Verification, and Validation in Visualization (EuroRV3)).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Visualization
Testing
Acoustic waves

Hemorrhages detection in atherosclerotic plaques using ultrasound and photoacoustic, phantom study

Gouteux, L. K. L., Arabul, M. Ü., Rutten, M. C. M., Van De Vosse, F. N. & Lopata, R. G. P., 31 Oct 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. Brussels: IEEE Computer Society, 1 p. 8091816

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

hemorrhages
strokes
blood
optical absorption
arteries

HIFUtk: visual analytics for high intensity focused ultrasound simulation

Modena, D., van Dijk, E. V. M., Bosnacki, D., ten Eikelder, H. M. M. & Westenberg, M. A., 2017, Eurographics Workshop on Visual Computing for Biology and Medicine. Bruckner, S., Hennemuth, A., Kainz, B., Hotz, I., Merhof, D. & Rieder, C. (eds.). Geneve: The Eurographics Association, p. 73-82 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

bones
simulation
rabbits
human body
metastasis
2 Citations (Scopus)
2 Downloads (Pure)

Improved ultrasound-based mechanical characterization of abdominal aortic aneurysms

Petterson, N. J., Van Disseldorp, E. M. J., Van De Vosse, F. N., Van Sambeek, M. R. H. M. & Lopata, R. G. P., 31 Oct 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. Brussels: IEEE Computer Society, 1 p. 8091744

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

aorta
spine
stress analysis
vessels
stiffness
1 Downloads (Pure)

In-vivo mechanical characterization of abdominal aortic aneurysms and healthy aortas using 4D ultrasound: a comparison study

Van Disseldorp, E. M. J., Petterson, N. J., Van De Vosse, F. N., Van Sambeek, M. & Lopata, R. G. P., 31 Oct 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. Brussels: IEEE Computer Society, 1 p. 8091610

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

aorta
risk assessment
stress analysis
7 Downloads (Pure)

Mechanical characterization of vascular tissue using ultrasound

De Ruijter, J., Van De Vosse, F. N., Van Sambeek, M. J. M. & Lopata, R. G. P., 31 Oct 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. Brussels: IEEE Computer Society, 1 p. 8092737

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

strokes
decision making
surgery
stiffness
mechanical properties
1 Citation (Scopus)
2 Downloads (Pure)

Modeling patients' methylmalonic acid levels using probabilistic fuzzy systems

Almeida, R. J., van Loon, S., Kaymak, U., Wilbik, A., Scharnhorst, V. & Boer, A. K., 23 Aug 2017, 2017 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), 9-12 July 2017, Naples, Italy. Piscataway: Institute of Electrical and Electronics Engineers, p. 1-6 6 p. 8015766

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Vitamins
Fuzzy systems
Fuzzy System Models
Fuzzy Systems
Acids