Department of Biomedical Engineering

Research Output

2019

Mechanical analysis of aortic aneurysms using 3D ultrasound : towards patient-specific risk assessment

van Disseldorp, E. M. J., 10 Jan 2019, Eindhoven: Technische Universiteit Eindhoven. 178 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

Open Access
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296 Downloads (Pure)

Mechanical and biochemical response of human skin to diverse loading conditions

Soetens, J. F. J., 18 Jun 2019, Eindhoven: Technische Universiteit Eindhoven. 112 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

Open Access
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216 Downloads (Pure)

Mechanically driven adaptation in engineered cardiovascular tissues

van Kelle, A. J., 31 Jan 2019, Eindhoven: Technische Universiteit Eindhoven. 134 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

Open Access
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9 Downloads (Pure)

Metabolic adaptation, transitions and resilience in overweight individuals

Aktas, G. & O’Donovan, S. D., Oct 2019

Research output: Other contributionAcademic

Micro-scaled topographies direct differentiation of human epidermal stem cells

Zijl, S., Vasilevich, A. S., Viswanathan, P., Helling, A. L., Beijer, N. R. M., Walko, G., Chiappini, C., de Boer, J. & Watt, F. M., 15 Jan 2019, In : Acta Biomaterialia. 84, p. 133-145 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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3 Citations (Scopus)
46 Downloads (Pure)

Microvascular dysfunction is associated with worse cognitive performance: the Maastricht study

Rensma, S., van Sloten, T. T., Houben, A. J. H. M., van Boxtel, M. P. J., Berendschot, T. T. J. M., Jansen, J. F. A., Kroon, A. A., Koster, A., Backes, W. H., Schaper, N., Dinant, G. J., Schalkwijk, C. G., Henry, R. M. A., Wolfs, E. M. L., van Heumen, M. J. A., Schram, M. T. & Stehouwer, C. D. A., 2019, In : Journal of Vascular Research. 56, S1, p. 94 1 p., 203.

Research output: Contribution to journalMeeting AbstractAcademic

Open Access

Mimicking active biopolymer networks with a synthetic hydrogel

Fernández-Castano Romera, M., Göstl, R., Shaikh, H., ter Huurne, G., Schill, J., Voets, I. K., Storm, C. & Sijbesma, R. P., 6 Feb 2019, In : Journal of the American Chemical Society. 141, 5, p. 1989-1997 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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4 Citations (Scopus)
88 Downloads (Pure)
Open Access
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6 Citations (Scopus)
23 Downloads (Pure)

Model predictive control for MR-HIFU-mediated, uniform hyperthermia

Sebeke, L., Deenen, D. A., Maljaars, E., Heijman, E., de Jager, B., Heemels, W. P. M. H. & Grüll, H., 1 Jan 2019, In : International Journal of Hyperthermia. 36, 1, p. 1040-1050 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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22 Downloads (Pure)

Modular, lightweight, wireless potentiostat-on-a-disc for electrochemical detection in centrifugal microfluidics

Rajendran, S. T., Scarano, E., Bergkamp, M. H., Capria, A. M., Cheng, C. H., Sanger, K., Ferrari, G., Nielsen, L. H., Hwu, E. T., Zór, K. & Boisen, A., 17 Sep 2019, In : Analytical Chemistry. 91, 18, p. 11620-11628 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Modulating protein–protein interaction networks in protein homeostasis

Zhong, M., Lee, G. M., Sijbesma, E., Ottmann, C. & Arkin, M. R., 1 Jun 2019, In : Current Opinion in Chemical Biology. 50, p. 55-65 11 p.

Research output: Contribution to journalReview articleAcademicpeer-review

4 Citations (Scopus)
3 Downloads (Pure)

Molecular programming of biodegradable nanoworms via ionically induced morphology switch toward asymmetric therapeutic carriers

Cao, S., Shao, J., Xia, Y., Che, H., Zhong, Z., Meng, F., van Hest, J. C. M., Abdelmohsen, L. K. E. A. & Williams, D. S., 1 Sep 2019, In : Small. 15, 38, 8 p., 1901849.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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4 Citations (Scopus)
22 Downloads (Pure)

Molecular recognition of proteins by cucurbiturils

de Vink, P. J. & Brunsveld, L., 5 Nov 2019, Cucurbiturils and Related Macrocycles. Kim, K. (ed.). London: Royal Society of Chemistry, p. 464-482 19 p. (Monographs in Supramolecular Chemistry; no. 28).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

1 Downloads (Pure)

Multifaceted cell mimicry in coacervate-based synthetic cells

Mason, A. & Hest, van, J. C. M., Nov 2019, In : Emerging Topics in Life Sciences. 3, 5, p. 567-571 5.

Research output: Contribution to journalArticleAcademicpeer-review

Multivalency in a dendritic host-guest system

Smeijers, A. F., Pieterse, K., Hilbers, P. A. J. & Markvoort, A. J., 9 Apr 2019, In : Macromolecules. 52, 7, p. 2778-2788 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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33 Downloads (Pure)

Multivalent ligands with tailor-made anion binding motif as stabilizers of protein–protein interactions

Bartsch, L., Bartel, M., Gigante, A., Iglesias-Fernández, J., Ruiz-Blanco, Y. B., Beuck, C., Briels, J., Toetsch, N., Bayer, P., Sanchez-Garcia, E., Ottmann, C. & Schmuck, C., 2 Dec 2019, In : ChemBioChem. 20, 23, p. 2921-2926 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)

Multivalent ultrasensitive interfacing of supramolecular 1D nanoplatforms

Magdalena Estirado, E., Aleman Garcia, M. A., Schill, J. & Brunsveld, L., 13 Nov 2019, In : Journal of the American Chemical Society. 141, 45, p. 18030-18037 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
15 Downloads (Pure)

Muti-shell diffusion MRI harmonisation and enhancement challenge (MUSHAC): progress and results

Ning, L., Bonet-Carne, E., Grussu, F., Sepehrband, F., Kaden, E., Veraart, J., Blumberg, S. B., Khoo, C. S., Palombo, M., Coll-Font, J., Scherrer, B., Warfield, S. K., Karayumak, S. C., Rathi, Y., Koppers, S., Weninger, L., Ebert, J., Merhof, D., Moyer, D., Pietsch, M. & 11 others, Christiaens, D., Teixeira, R., Tournier, J-D., Zhylka, A., Pluim, J., Parker, G., Rudrapatna, U., Evans, J., Charron, C., Jones, D. K. & Tax, C. W. M., 2019, Computational Diffusion MRI: International MICCAI Workshop, Granada, Spain, September 2018. Ning, L., Tax, C. M. W., Grussu, F., Bonet-Carne, E. & Sepehrband, F. (eds.). 226249 ed. Cham: Springer, p. 217-224 8 p. (Mathematics and Visualization).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademic

Open Access
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1 Citation (Scopus)
48 Downloads (Pure)

Myoglobin and troponin concentrations are increased in early stage deep tissue injury

Traa, W. A., Strijkers, G. J., Bader, D. L. & Oomens, C. W. J., 1 Apr 2019, In : Journal of the Mechanical Behavior of Biomedical Materials. 92, p. 50-57 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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2 Citations (Scopus)
25 Downloads (Pure)

Myosin II isoforms play distinct roles in adherens junction biogenesis

Heuzé, M. L., Sankara Narayana, G. H. N., D'Alessandro, J., Cellerin, V., Dang, T., Williams, D. S., van Hest, J. C. M., Marcq, P., Mège, R. M. & Ladoux, B., 5 Sep 2019, In : eLife. 8, 30 p., e46599.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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4 Citations (Scopus)
141 Downloads (Pure)

Nanoimmunotherapy to treat ischaemic heart disease

Duivenvoorden, R., Senders, M. L., van Leent, M. M. T., Pérez-Medina, C., Nahrendorf, M., Fayad, Z. A. & Mulder, W. J. M., Jan 2019, In : Nature Reviews. Cardiology. 16, 1, p. 21-32 12 p.

Research output: Contribution to journalReview articleAcademicpeer-review

3 Citations (Scopus)

Not-so-supervised: a survey of semi-supervised, multi-instance, and transfer learning in medical image analysis

Cheplygina, V., de Bruijne, M. & Pluim, J. P. W., May 2019, In : Medical Image Analysis. 54, p. 280-296 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

19 Citations (Scopus)
2 Downloads (Pure)

Octa-arginine boosts the penetration of elastin-like polypeptide nanoparticles in 3D cancer models

van Oppen, L. M. P. E., Pille, J., Stuut, C., van Stevendaal, M., van der Vorm, L. N., Smeitink, J. A. M., Koopman, W. J. H., Willems, P. H. G. M., van Hest, J. C. M. & Brock, R., 1 Apr 2019, In : European Journal of Pharmaceutics and Biopharmaceutics. 137, p. 175-184 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)
1 Downloads (Pure)

On fiber orientation distribution peak selection for diffusion MRI fiber tractography

Zhylka, A., Leemans, A., Pluim, J. & De Luca, A., 1 Sep 2019, p. 14. 1 p.

Research output: Contribution to conferenceAbstract

Open Access
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20 Downloads (Pure)

On the impact of the mechanical environment in vascular tissue engineering: an in vitro study

van Haaften, E. E., 1 Oct 2019, Eindhoven: Technische Universiteit Eindhoven. 248 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

14 Downloads (Pure)

Ontwerp van een kwaliteitssysteem voor de afdeling medische technologie

Plieger, M., 8 Jan 2019, Eindhoven: Technische Universiteit Eindhoven. 50 p.

Research output: ThesisPd Eng Thesis

Optical control of antibody activity using photocleavable bivalent peptide-DNA locks

Wouters, S., Wijker, E. & Merkx, M., 1 Oct 2019, In : ChemBioChem. 20, 19, p. 2463-2466 4 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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2 Citations (Scopus)
13 Downloads (Pure)

Optimal input configuration of dynamic contrast enhanced MRI in convolutional neural networks for liver segmentation

Jansen, M. J. A., Kuijf, H. J. & Pluim, J. P. W., 2019, Medical Imaging 2019: Image Processing. Angelini, E. D., Angelini, E. D., Angelini, E. D. & Landman, B. A. (eds.). Bellingham: SPIE, 8 p. 109491V. (Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
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1 Citation (Scopus)

Optimized (pre)analytical conditions and workflow for droplet digital PCR analysis of cell-Free DNA from patients with suspected lung carcinoma

de Kock, R., Deiman, B., Kraaijvanger, R. & Scharnhorst, V., 1 Sep 2019, In : The Journal of Molecular Diagnostics. 21, 5, p. 895-902 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

1 Downloads (Pure)

Optimized ChIP-seq method facilitates transcription factor profiling in human tumors

Singh, A. A., Schuurman, K., Nevedomskaya, E., Stelloo, S., Linder, S., Droog, M., Kim, Y., Sanders, J., van der Poel, H., Bergman, A. M., Wessels, L. F. A. & Zwart, W., Feb 2019, In : Life Science Alliance. 2, 1, 12 p., e201800115.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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7 Citations (Scopus)
31 Downloads (Pure)

Pathway complexity in the stacking of imine-linked macrocycles related to two-dimensional covalent organic frameworks

Wang, S., Chavez, A., Thomas, S., Li, H., Flanders, N., Sun, C., Strauss, M., Chen, L., Markvoort, B., Bredas, J-L. & Dichtel, W., 10 Sep 2019, In : Chemistry of Materials. 31, 17, p. 7104−7111 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)

Pathway control in cooperative vs. anti-cooperative supramolecular polymers

Herkert, L., Droste, J., Kartha, K. K., Korevaar, P. A., de Greef, T. F. A., Hansen, M. R. & Fernández, G., 5 Aug 2019, In : Angewandte Chemie - International Edition. 58, 33, p. 11344-11349 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

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6 Citations (Scopus)
23 Downloads (Pure)

Physicochemical characterization of polymer-stabilized coacervate protocells

Yewdall, N. A., Buddingh, B. C., Altenburg, W. J., Timmermans, S. B. P. E., Vervoort, D. F. M., Abdelmohsen, L. K. E. A., Mason, A. F. & van Hest, J., 15 Oct 2019, In : ChemBioChem. 20, 20, p. 2643-2652 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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2 Citations (Scopus)
14 Downloads (Pure)

Preclinical outcomes and translational challenges of material-based in situ vascular tissue engineering

Duijvelshoff, R., 4 Jul 2019, Eindhoven: Technische Universiteit Eindhoven. 201 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

9 Downloads (Pure)

Prediabetes and type 2 diabetes are associated with wider retinal arterioles and venules

Li, W., Schram, M. T., Berendschot, T., Webers, C., Kroon, A. A., van der Kallen, C., Henry, R., Koster, A., Dagnelie, P., Schaper, N., Huang, F., Dashtbozorg, B., Tan, T., Zhang, J., Sureshjani, S. A., Romeny, B. T. H., Stehouwer, C. D. A. & Houben, A. J. H. M., 2019, In : Journal of Vascular Research. 56, Suppl. 1, p. 73 1 p., 157.

Research output: Contribution to journalMeeting AbstractAcademic

Open Access

Predicting breast tumor proliferation from whole-slide images: The TUPAC16 challenge

Veta, M., Heng, Y. J., Stathonikos, N., Bejnordi, B. E., Beca, F., Wollmann, T., Rohr, K., Shah, M. A., Wang, D., Rousson, M., Hedlund, M., Tellez, D., Ciompi, F., Zerhouni, E., Lanyi, D., Viana, M., Kovalev, V., Liauchuk, V., Phoulady, H. A., Qaiser, T. & 13 others, Graham, S., Rajpoot, N., Sjöblom, E., Molin, J., Paeng, K., Hwang, S., Park, S., Jia, Z., Chang, E. I-C., Xu, Y., Beck, A. H., van Diest, P. J. & Pluim, J. P. W., May 2019, In : Medical Image Analysis. 54, p. 111-121 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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13 Citations (Scopus)
40 Downloads (Pure)

Preface

Bankhead, P., Janowczyk, A., Reyes-Aldasoro, C. C., Sirinukunwattana, K. & Veta, M., 1 Jan 2019, Digital Pathology. Reyes-Aldasoro, C. C., Veta, M., Janowczyk, A., Bankhead, P. & Sirinukunwattana, K. (eds.). Cham: Springer, p. v-vi 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11435).

Research output: Chapter in Book/Report/Conference proceedingForeword/postscriptAcademic

Open Access

Progressively growing convolutional networks for end-to-end deformable image registration

Eppenhof, K., Lafarge, M. & Pluim, J., 15 Mar 2019, Medical Imaging 2019 Image Processing. Landman, B. A. & Angelini, E. D. (eds.). Bellingham: SPIE, 7 p. 109491C. (Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
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2 Citations (Scopus)
85 Downloads (Pure)

Progressively trained convolutional neural networks for deformable image registration

Eppenhof, K., Lafarge, M., Veta, M. & Pluim, J., 15 Nov 2019, In : IEEE Transactions on Medical Imaging.

Research output: Contribution to journalArticleAcademicpeer-review

Pulmonary CT registration through supervised learning with convolutional neural networks

Eppenhof, K. A. J. & Pluim, J. P. W., 2 May 2019, In : IEEE Transactions on Medical Imaging. 38, 5, p. 1097-1105 9 p., 8510836.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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7 Citations (Scopus)
68 Downloads (Pure)

Quality of vision after ultrathin descemet stripping automated endothelial keratoplasty: a multicentre randomized clinical trial

Dickman, M. M., Dunker, S. L., Kruit, P. J., Remeijer, L., van Rooij, J., van der Lelij, A., Wijdh, R. H. J., van den Biggelaar, F. J. H. M., Berendschot, T. T. J. M., van den Berg, T. J. T. P. & Nuijts, R. M. M. A., Jun 2019, In : Acta Ophthalmologica. 97, 4, p. E671-E672 2 p.

Research output: Contribution to journalLetterAcademicpeer-review

Quantifying guest–host dynamics in supramolecular assemblies to analyze their robustness

Bastings, M. M. C., Hermans, T. M., Spiering, A. J. H., Kemps, E. W. L., Albertazzi, L., Kurisinkal, E. E. & Dankers, P. Y. W., 1 Jan 2019, In : Macromolecular Bioscience. 19, 1, 11 p., 1800296.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)
2 Downloads (Pure)

Rate of dimer formation in stable colloidal solutions quantified using an attractive interparticle force

Scheepers, M. R. W., Romijn, A. R., van Ijzendoorn, L. J. & Prins, M. W. J., 13 Aug 2019, In : Langmuir. 35, 32, p. 10533-10541 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
17 Downloads (Pure)

Ratiometric bioluminescent sensor proteins based on intramolecular split luciferase complementation

Ni, Y., Arts, R. & Merkx, M., 25 Jan 2019, In : ACS Sensors. 4, 1, p. 20-25 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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5 Citations (Scopus)
43 Downloads (Pure)

Reducing distortions in echo-planar breast imaging at ultrahigh field with high-resolution off-resonance maps

van Rijssel, M. J., Zijlstra, F., Seevinck, P. R., Luijten, P. R., Gilhuijs, K. G. A., Klomp, D. W. J. & Pluim, J. P. W., Jul 2019, In : Magnetic Resonance in Medicine. 82, 1, p. 425-435 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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2 Citations (Scopus)
30 Downloads (Pure)

Renal epithelial monolayer formation on monomeric and polymeric catechol functionalized supramolecular biomaterials

van Gaal, R. C., Fedecostante, M., Fransen, P. P. K. H., Masereeuw, R. & Dankers, P. Y. W., Feb 2019, In : Macromolecular Bioscience. 19, 2, 7 p., 1800300.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)
3 Downloads (Pure)

Response: early phacoemulsification after acute angle closure in patients with coexisting cataract

Romkens, H. C. S., Beckers, H. J. M., Schouten, J. S. A. G., Nuijts, R. M. M. A., Berendschot, T. T. J. M., Breusegem, C. M. & Webers, C. A. B., 1 Jun 2019, In : Journal of Glaucoma. 28, 6, p. E108 1 p., e108.

Research output: Contribution to journalLetterAcademicpeer-review

Retinal microvascular biomarker extraction on fundus images from the Maastricht study using supervised deep learning

Heslinga, F., Pluim, J., Dasht Bozorg, B., Berendschot, T., Houben, A. J. H. M. & Veta, M., Apr 2019, In : Journal of Vascular Research. 56, suppl. 1, p. 120-120 1 p., 261.

Research output: Contribution to journalMeeting AbstractAcademic

Open Access
1 Downloads (Pure)