Department of Biomedical Engineering

Research Output 1962 2019

2019
Open Access
File
Micellization
Surface-Active Agents
self consistent fields
Surface active agents
Salts

Micro-scaled topographies direct differentiation of human epidermal stem cells

Zijl, S., Vasilevich, A. S., Viswanathan, P., Helling, A. L., Beijer, N. R. M., Walko, G., Chiappini, C., de Boer, J. & Watt, F. M., 15 Jan 2019, In : Acta Biomaterialia. 84, p. 133-145 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File

Microvascular dysfunction is associated with worse cognitive performance: the Maastricht study

Rensma, S., van Sloten, T. T., Houben, A. J. H. M., van Boxtel, M. P. J., Berendschot, T. T. J. M., Jansen, J. F. A., Kroon, A. A., Koster, A., Backes, W. H., Schaper, N., Dinant, G. J., Schalkwijk, C. G., Henry, R. M. A., Wolfs, E. M. L., van Heumen, M. J. A., Schram, M. T. & Stehouwer, C. D. A., 2019, In : Journal of Vascular Research. 56, S1, p. 94 1 p., 203

Research output: Contribution to journalMeeting AbstractAcademic

Open Access

Midterm results after abandoning routine preemptive coil embolization of the internal iliac artery during endovascular aneurysm repair

‘t Mannetje, Y. W., Broos, P. P. H. L., Teijink, J. A. W., Stokmans, R. A., Cuypers, P. W. M. & van Sambeek, M. R. H. M., 1 Apr 2019, In : Journal of Endovascular Therapy. 26, 2, p. 238-244 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Iliac Artery
Aneurysm
Endoleak
Iliac Aneurysm
Buttocks
1 Citation (Scopus)

Mimicking active biopolymer networks with a synthetic hydrogel

Fernández-Castano Romera, M., Göstl, R., Shaikh, H., ter Huurne, G., Schill, J., Voets, I. K., Storm, C. & Sijbesma, R. P., 6 Feb 2019, In : Journal of the American Chemical Society. 141, 5, p. 1989-1997 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Biopolymers
Hydrogel
Hydrogels
Collagen
Residual stresses
Open Access
File
Terpolymers
Cell membranes
Encapsulation
Cell culture
Self assembly
1 Citation (Scopus)

Modeling cardiac growth: an alternative approach

van Osta, N. C. J., van der Donk, L., Rondanina, E. & Bovendeerd, P., 2019, FIMH 2019: Functional Imaging and Modeling of the Heart. Coudière, Y., Ozenne, V., Vigmond, E. & Zemzemi, N. (eds.). Cham: Springer Nature Switzerland AG, p. 258-265 8 p. (Lecture Notes in Computer Science; vol. 11504)

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

Growth
Homeless Youth
Mechanics
Hemodynamics

Modulating protein–protein interaction networks in protein homeostasis

Zhong, M., Lee, G. M., Sijbesma, E., Ottmann, C. & Arkin, M. R., 1 Jun 2019, In : Current Opinion in Chemical Biology. 50, p. 55-65 11 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Protein Interaction Maps
Homeostasis
Proteins
Complex networks
Molecules

Molecular programming of biodegradable nanoworms via ionically induced morphology switch toward asymmetric therapeutic carriers

Cao, S., Shao, J., Xia, Y., Che, H., Zhong, Z., Meng, F., van Hest, J. C. M., Abdelmohsen, L. K. E. A. & Williams, D. S., 5 Aug 2019, In : Small. 1901849

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Nanostructures
Micelles
Block copolymers
Switches
Nanomedicine
7 Citations (Scopus)

Molecular repolarisation of tumour-associated macrophages

van Dalen, F. J., van Stevendaal, M. H. M. E., Fennemann, F. L., Verdoes, M. & Ilina, O., 1 Jan 2019, In : Molecules. 24, 1, 25 p., 9

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
File
macrophages
Macrophages
Tumors
tumors
Neoplasms

Multimodal positron emission tomography imaging to quantify uptake of 89Zr-labeled liposomes in the atherosclerotic vessel wall

Lobatto, M. E., Binderup, T., Robson, P. M., Giesen, L. F. P., Calcagno, C., Witjes, J., Fay, F., Baxter, S., Wessel, C. H., Eldib, M., Bini, J., Carlin, S. D., Stroes, E. S. G., Storm, G., Kjaer, A., Lewis, J. S., Reiner, T., Fayad, Z. A., Mulder, W. J. M. & Pérez-Medina, C., 16 May 2019, In : Bioconjugate Chemistry.

Research output: Contribution to journalArticleAcademicpeer-review

Positron emission tomography
Liposomes
Positron-Emission Tomography
Nanoparticles
Magnetic resonance imaging

Multivalency in a dendritic host-guest system

Smeijers, A. F., Pieterse, K., Hilbers, P. A. J. & Markvoort, A. J., 9 Apr 2019, In : Macromolecules. 52, 7, p. 2778-2788 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Dendrimers
Supramolecular chemistry
Binding sites
Urea
Self assembly

Muti-shell diffusion MRI harmonisation and enhancement challenge (MUSHAC): progress and results

Ning, L., Bonet-Carne, E., Grussu, F., Sepehrband, F., Kaden, E., Veraart, J., Blumberg, S. B., Khoo, C. S., Palombo, M., Coll-Font, J., Scherrer, B., Warfield, S. K., Karayumak, S. C., Rathi, Y., Koppers, S., Weninger, L., Ebert, J., Merhof, D., Moyer, D., Pietsch, M. & 11 othersChristiaens, D., Teixeira, R., Tournier, J-D., Zhylka, A., Pluim, J., Parker, G., Rudrapatna, U., Evans, J., Charron, C., Jones, D. K. & Tax, C. W. M., 2019, Computational Diffusion MRI: International MICCAI Workshop, Granada, Spain, September 2018. Bonet-Carne, E., Grussu, F., Ning, L., Sepehrband, F. & Tax, C. M. W. (eds.). Cham: Springer, p. 217-224 (Mathematics and Visualization)

Research output: Chapter in Book/Report/Conference proceedingChapterAcademic

Magnetic resonance imaging
Computational methods
Neural networks
1 Citation (Scopus)

Myoglobin and troponin concentrations are increased in early stage deep tissue injury

Traa, W. A., Strijkers, G. J., Bader, D. L. & Oomens, C. W. J., 1 Apr 2019, In : Journal of the Mechanical Behavior of Biomedical Materials. 92, p. 50-57 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Troponin
Myoglobin
Blood
Tissue
Biomarkers
3 Citations (Scopus)

Nanoimmunotherapy to treat ischaemic heart disease

Duivenvoorden, R., Senders, M. L., van Leent, M. M. T., Pérez-Medina, C., Nahrendorf, M., Fayad, Z. A. & Mulder, W. J. M., 2019, In : Nature Reviews. Cardiology. 16, p. 21-32

Research output: Contribution to journalArticleAcademicpeer-review

Myocardial Ischemia
Atherosclerosis
Inflammation
Lipids
Recurrence
3 Citations (Scopus)

Notochordal cell matrix as a therapeutic agent for intervertebral disc regeneration

de Vries, S., van Doeselaar, M., Meij, B., Tryfonidou, M. & Ito, K., 1 Jun 2019, In : Tissue engineering. Part A. 25, 11-12, p. 830-841 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Intervertebral Disc
Glycosaminoglycans
Regeneration
Conditioned Culture Medium
Interleukin-1beta
2 Citations (Scopus)

Not-so-supervised: a survey of semi-supervised, multi-instance, and transfer learning in medical image analysis

Cheplygina, V., de Bruijne, M. & Pluim, J. P. W., 29 Mar 2019, In : Medical Image Analysis. 54, p. 280-296 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

Medical imaging
Diagnostic Imaging
Image analysis
Learning algorithms
Learning systems
2 Citations (Scopus)

Octa-arginine boosts the penetration of elastin-like polypeptide nanoparticles in 3D cancer models

van Oppen, L. M. P. E., Pille, J., Stuut, C., van Stevendaal, M., van der Vorm, L. N., Smeitink, J. A. M., Koopman, W. J. H., Willems, P. H. G. M., van Hest, J. C. M. & Brock, R., 1 Apr 2019, In : European Journal of Pharmaceutics and Biopharmaceutics. 137, p. 175-184 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Cell-Penetrating Peptides
Elastin
Nanoparticles
Arginine
Peptides

On the impact of the mechanical environment in vascular tissue engineering: an in vitro study

van Haaften, E., 1 Oct 2019, (Accepted/In press) Eindhoven: Technische Universiteit Eindhoven. 248 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)Academic

1 Citation (Scopus)

On the relationship between dynamic contrast-enhanced ultrasound parameters and the underlying vascular architecture extracted from acoustic angiography

Panfilova, A., Shelton, S. E., Caresio, C., van Sloun, R. J. G., Molinari, F., Wijkstra, H., Dayton, P. A. & Mischi, M., Feb 2019, In : Ultrasound in Medicine and Biology. 45, 2, p. 539-548

Research output: Contribution to journalArticleAcademicpeer-review

angiography
Acoustics
Blood Vessels
Angiography
Perfusion

Ontwerp en evaluatie van een innovatiestructuur voor de verpleegafdelingen van het Deventer Ziekenhuis

Blezer, K., 15 May 2019, Eindhoven: Technische Universiteit Eindhoven. 68 p.

Research output: ThesisPd Eng ThesisAcademic

Ontwerp van een kwaliteitssysteem voor de afdeling medische technologie

Plieger, M., 8 Jan 2019, Eindhoven: Technische Universiteit Eindhoven. 50 p.

Research output: ThesisPd Eng ThesisAcademic

services
planning

Optical control of antibody activity using photocleavable bivalent peptide-DNA locks

Wouters, S., Wijker, E. & Merkx, M., 10 May 2019, In : ChemBioChem.

Research output: Contribution to journalArticleAcademicpeer-review

Peptides
Antibodies
DNA
Ligands
Light

Optimized (pre)analytical conditions and workflow for droplet digital PCR analysis of cell-Free DNA from patients with suspected lung carcinoma

de Kock, R., Deiman, B., Kraaijvanger, R. & Scharnhorst, V., 1 Sep 2019, In : The Journal of Molecular Diagnostics. 21, 5, p. 895-902 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Workflow
Carcinoma
Polymerase Chain Reaction
Lung
DNA
1 Citation (Scopus)

Optimized ChIP-seq method facilitates transcription factor profiling in human tumors

Singh, A. A., Schuurman, K., Nevedomskaya, E., Stelloo, S., Linder, S., Droog, M., Kim, Y., Sanders, J., van der Poel, H., Bergman, A. M., Wessels, L. F. A. & Zwart, W., 1 Jan 2019, In : Life Science Alliance. 2, 1, 12 p., e201800115

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Chromatin Immunoprecipitation
tumor
Chromatin
chromatin
Tumors

Pathway complexity in the stacking of imine-linked macrocycles related to two-dimensional covalent organic frameworks

Wang, S., Chavez, A., Thomas, S., Li, H., Flanders, N., Sun, C., Strauss, M., Chen, L., Markvoort, B., Bredas, J-L. & Dichtel, W., 31 Aug 2019, In : Chemistry of Materials. 31, 17, p. 7104−7111 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Imines
Personal digital assistants
Bearings (structural)
Monomers
Polymerization

Pathway control in cooperative vs. anti-cooperative supramolecular polymers

Herkert, L., Droste, J., Kartha, K. K., Korevaar, P. A., de Greef, T. F. A., Hansen, M. R. & Fernández, G., 5 Aug 2019, In : Angewandte Chemie - International Edition. 58, 33, p. 11344-11349

Research output: Contribution to journalArticleAcademicpeer-review

File
Polymers
Self assembly
Functional materials
Solubility
Monomers
Artificial Cells
Biochemical Phenomena
Polymers
Membranes
Macromolecules

Pneumatic unidirectional cell stretching device for mechanobiological studies of cardiomyocytes

Kreutzer, J., Viehrig, M., Pölönen, R-P., Zhao, F., Ojala, M., Aalto-Setälä, K. & Kallio, P., 23 Aug 2019, In : Biomechanics and Modeling in Mechanobiology.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cardiac Myocytes
Pneumatics
Stretching
Imaging techniques
Induced Pluripotent Stem Cells

Preclinical outcomes and translational challenges of material-based in situ vascular tissue engineering

Duijvelshoff, R., 4 Jul 2019, Eindhoven: Technische Universiteit Eindhoven. 201 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)Academic

Prediabetes and type 2 diabetes are associated with wider retinal arterioles and venules

Li, W., Schram, M. T., Berendschot, T., Webers, C., Kroon, A. A., van der Kallen, C., Henry, R., Koster, A., Dagnelie, P., Schaper, N., Huang, F., Dashtbozorg, B., Tan, T., Zhang, J., Sureshjani, S. A., Romeny, B. T. H., Stehouwer, C. D. A. & Houben, A. J. H. M., 2019, In : Journal of Vascular Research. 56, Suppl. 1, p. 73 1 p., 157

Research output: Contribution to journalMeeting AbstractAcademic

Open Access
5 Citations (Scopus)

Predicting breast tumor proliferation from whole-slide images: The TUPAC16 challenge

Veta, M., Heng, Y. J., Stathonikos, N., Bejnordi, B. E., Beca, F., Wollmann, T., Rohr, K., Shah, M. A., Wang, D., Rousson, M., Hedlund, M., Tellez, D., Ciompi, F., Zerhouni, E., Lanyi, D., Viana, M., Kovalev, V., Liauchuk, V., Phoulady, H. A., Qaiser, T. & 13 othersGraham, S., Rajpoot, N., Sjöblom, E., Molin, J., Paeng, K., Hwang, S., Park, S., Jia, Z., Chang, E. I-C., Xu, Y., Beck, A. H., van Diest, P. J. & Pluim, J. P. W., 27 Feb 2019, In : Medical Image Analysis. 54, p. 111-121 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Tumors
Breast Neoplasms
Neoplasms
Mitosis
Image analysis
2 Citations (Scopus)

Predictive factors of discordance between the instantaneous wave-free ratio and fractional flow reserve

Dérimay, F., Johnson, N. P., Zimmermann, F. M., Adjedj, J., Witt, N., Hennigan, B., Koo, B. K., Barbato, E., Esposito, G., Trimarco, B., Rioufol, G., Park, S. J., Baptista, S. B., Chrysant, G. S., Leone, A. M., Jeremias, A., Berry, C., De Bruyne, B., Oldroyd, K. G., Pijls, N. H. J. & 1 othersFearon, W. F., Sep 2019, In : Catheterization and Cardiovascular Interventions. 94, 3, p. 356-363

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Pathologic Constriction
Heart Rate
Hemodynamics
Gold
Multicenter Studies

Preface

Bankhead, P., Janowczyk, A., Reyes-Aldasoro, C. C., Sirinukunwattana, K. & Veta, M., 1 Jan 2019, Digital Pathology. Reyes-Aldasoro, C. C., Veta, M., Janowczyk, A., Bankhead, P. & Sirinukunwattana, K. (eds.). Cham: Springer, p. v-vi 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11435)

Research output: Chapter in Book/Report/Conference proceedingForeword/postscriptAcademic

Open Access

Progressively growing convolutional networks for end-to-end deformable image registration

Eppenhof, K., Lafarge, M. & Pluim, J., 15 Mar 2019, Medical Imaging 2019 Image Processing. Landman, B. A. & Angelini, E. D. (eds.). Bellingham: SPIE, 7 p. 109491C. (Proceedings of SPIE; vol. 10949)

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Open Access
File
Image registration
Neural networks

Prospective follow-Up of cortical interruptions, bone density, and micro-structure detected on HR-pQCT: A study in patients with rheumatoid arthritis and healthy subjects

Peters, M., van den Bergh, J. P., Geusens, P., Scharmga, A., Loeffen, D., Weijers, R., van Rietbergen, B. & van Tubergen, A., 1 Jun 2019, In : Calcified Tissue International. 104, 6, p. 571-581

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Bone Density
Antirheumatic Agents
Rheumatoid Arthritis
Healthy Volunteers
Tomography

Pulmonary CT registration through supervised learning with convolutional neural networks

Eppenhof, K. A. J. & Pluim, J. P. W., 2 May 2019, In : IEEE Transactions on Medical Imaging. 38, 5, p. 1097-1105 9 p., 8510836

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Supervised learning
Parameterization
Learning
Neural networks
Lung

Quality of vision after ultrathin descemet stripping automated endothelial keratoplasty: a multicentre randomized clinical trial

Dickman, M. M., Dunker, S. L., Kruit, P. J., Remeijer, L., van Rooij, J., van der Lelij, A., Wijdh, R. H. J., van den Biggelaar, F. J. H. M., Berendschot, T. T. J. M., van den Berg, T. J. T. P. & Nuijts, R. M. M. A., Jun 2019, In : Acta Ophthalmologica. 97, 4, p. E671-E672 2 p.

Research output: Contribution to journalLetterAcademicpeer-review

3 Citations (Scopus)
Vascular Stiffness
Abdominal Aortic Aneurysm
Healthy Volunteers
Volunteers
Aortic Rupture
1 Citation (Scopus)

Quantifying guest–host dynamics in supramolecular assemblies to analyze their robustness

Bastings, M. M. C., Hermans, T. M., Spiering, A. J. H., Kemps, E. W. L., Albertazzi, L., Kurisinkal, E. E. & Dankers, P. Y. W., 1 Jan 2019, In : Macromolecular Bioscience. 19, 1, 11 p., 1800296

Research output: Contribution to journalArticleAcademicpeer-review

Pyrimidinones
Fluorescence Recovery After Photobleaching
Photobleaching
Fluorescence Resonance Energy Transfer
Microfluidics

Rate of dimer formation in stable colloidal solutions quantified using an attractive interparticle force

Scheepers, M. R. W., Romijn, A. R., van Ijzendoorn, L. J. & Prins, M. W. J., 13 Aug 2019, In : Langmuir. 35, 32, p. 10533-10541 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Dimers
dimers
Agglomeration
Chemical reactivity
Particle interactions
1 Citation (Scopus)

Ratiometric bioluminescent sensor proteins based on intramolecular split luciferase complementation

Ni, Y., Arts, R. & Merkx, M., 25 Jan 2019, In : ACS Sensors. 4, 1, p. 20-25 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Luciferases
proteins
Proteins
sensors
Sensors

Reducing distortions in echo-planar breast imaging at ultrahigh field with high-resolution off-resonance maps

van Rijssel, M. J., Zijlstra, F., Seevinck, P. R., Luijten, P. R., Gilhuijs, K. G. A., Klomp, D. W. J. & Pluim, J. P. W., Jul 2019, In : Magnetic Resonance in Medicine. 82, 1, p. 425-435 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Echo-Planar Imaging
Breast
Nonparametric Statistics
Artifacts
Healthy Volunteers

RegressionExplorer: Interactive exploration of logistic regression models with subgroup analysis

Dingen, D., van 't Veer, M., Houthuizen, P., Mestrom, E. H. J., Korsten, E. H. H. M., Bouwman, A. R. A. & van Wijk, J., 1 Jan 2019, In : IEEE Transactions on Visualization and Computer Graphics. 25, 1, p. 246-255 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Logistics

Renal epithelial monolayer formation on monomeric and polymeric catechol functionalized supramolecular biomaterials

van Gaal, R. C., Fedecostante, M., Fransen, P. P. K. H., Masereeuw, R. & Dankers, P. Y. W., 2019, In : Macromolecular Bioscience. 19, 2, 7 p., 1800300

Research output: Contribution to journalArticleAcademicpeer-review

Pyrimidinones
Biocompatible Materials
Biomaterials
Catechols
Monolayers

Resorption of the calcium phosphate layer on S53P4 bioactive glass by osteoclasts

van Gestel, N., Schuiringa, R., Hennissen, J. H. P. H., Delsing, A., Ito, K., van Rietbergen, B., Hofmann, S. & Arts, C., 1 Aug 2019, In : Journal of Materials Science: Materials in Medicine. 30, 8, 13 p., 94

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
Bioactive glass
Calcium phosphate
Osteoclasts
Glass
Putty

Response: early phacoemulsification after acute angle closure in patients with coexisting cataract

Romkens, H. C. S., Beckers, H. J. M., Schouten, J. S. A. G., Nuijts, R. M. M. A., Berendschot, T. T. J. M., Breusegem, C. M. & Webers, C. A. B., Jun 2019, In : Journal of Glaucoma. 28, 6, 1 p., e108

Research output: Contribution to journalLetterAcademicpeer-review

Retinal microvascular biomarker extraction on fundus images from the Maastricht study using supervised deep learning

Heslinga, F., Pluim, J., Dasht Bozorg, B., Berendschot, T., Houben, A. J. H. M. & Veta, M., Apr 2019, In : Journal of Vascular Research. 56, suppl. 1, p. 120-120 1 p., 261

Research output: Contribution to journalMeeting AbstractAcademic

Open Access
1 Citation (Scopus)

Review on factors influencing physician guideline adherence in cardiology

Hoorn, C. J. G. M., Crijns, H. J. G. M., Dierick-van Daele, A. T. M. & Dekker, L. R. C., 1 Mar 2019, In : Cardiology in Review. 27, 2, p. 80-86 7 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Guideline Adherence
Cardiology
Physicians
Secondary Care Centers
Patient Compliance