Department of Biomedical Engineering

Research Output

2018

Metal ion-induced self-assembly and packaging of CCMV nanocapsules

Schoonen, L., van Eldijk, M. B. & van Hest, J. C. M., 5 Jun 2018, Protein scaffolds: design, synthesis, and applications. Udit, A. K. (ed.). Dordrecht: Springer, p. 57-67 11 p. (Methods in Molecular Biology; vol. 1798).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

1 Citation (Scopus)

Metastasis in context: modeling the tumor microenvironment with cancer-on-a-chip approaches

Sleeboom, J. J. F., Amirabadi, H. E., Nair, P., Sahlgren, C. M. & Den Toonder, J. M. J., 1 Mar 2018, In : Disease Models & Mechanisms. 11, 3, 17 p., 033100.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
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22 Citations (Scopus)
184 Downloads (Pure)

Microfabricated tuneable and transferable porous PDMS membranes for Organs-on-Chips

Quirós-Solano, W. F., Gaio, N., Stassen, O. M. J. A., Arik, Y. B., Silvestri, C., van Engeland, N. C. A., van der Meer, A., Passier, R., Sahlgren, C. M., Bouten, C. V. C., van den Berg, A., Dekker, R. & Sarro, P. M., 1 Dec 2018, In : Scientific Reports. 8, 1, 11 p., 13524.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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3 Citations (Scopus)
52 Downloads (Pure)

Minimally invasive glaucoma surgery with the InnFocus MicroShunt (R) in the Netherlands

Kujovic-Aleksov, S., Webers, C. A. B., Berendschot, T. T. J. M. & Beckers, H. J. M., Mar 2018, In : Acta Ophthalmologica. 96, p. 22-23

Research output: Contribution to journalMeeting AbstractAcademic

Open Access
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73 Downloads (Pure)

Model-based analysis of postprandial glycemic response dynamics for different types of food

Rozendaal, Y. J., Maas, A. H., van Pul, C., Cottaar, E. J. E., Haak, H. R., Hilbers, P. A. J. & van Riel, N. A., Jun 2018, In : Clinical Nutrition Experimental. 19, p. 32-45 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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10 Citations (Scopus)
86 Downloads (Pure)

Model checking: recent improvements and applications

Bošnački, D. & Wijs, A., 1 Oct 2018, In : International Journal on Software Tools for Technology Transfer. 20, 5, p. 493–497 5 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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54 Downloads (Pure)

Modeling of intracerebral interictal epileptic discharges: evidence for network interactions

Meesters, S., Ossenblok, P., Colon, A., Wagner, L., Schijns, O., Boon, P., Florack, L. & Fuster, A., 1 Jun 2018, In : Clinical Neurophysiology. 129, 6, p. 1276-1290 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
134 Downloads (Pure)

Modeling the effect of blue light irradiation on inflammatory skin diseases

Felix Garza, Z. C., 6 Nov 2018, Eindhoven: Technische Universiteit Eindhoven. 145 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

Open Access
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195 Downloads (Pure)

Modeling the interference between shear and longitudinal waves under high intensity focused ultrasound propagation in bone

Modena, D., Baragona, M., Bošnački, D., Breuer, B. J. T., Elevelt, A., Maessen, R. T. H., Hilbers, P. A. J. & ten Eikelder, H. M. M., 4 Dec 2018, In : Physics in Medicine and Biology. 63, 23, 12 p., 235024.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
24 Downloads (Pure)

Modelling the combined effects of collagen and cyclic strain on cellular orientation in collagenous tissues

Ristori, T., Notermans, T. M. W., Foolen, J., Kurniawan, N. A., Bouten, C. V. C., Baaijens, F. P. T. & Loerakker, S., 1 Dec 2018, In : Scientific Reports. 8, 1, 14 p., 8518.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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3 Citations (Scopus)
57 Downloads (Pure)

Modification of CCMV nanocages for enzyme encapsulation

Schoonen, L. & van Hest, J. C. M., 5 Jun 2018, Protein Scaffolds : Design, Synthesis, and Applications. Udit, A. K. (ed.). Dordrecht: Springer, p. 69-83 15 p. (Methods in Molecular Biology; vol. 1798).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

1 Citation (Scopus)

Modular, bioorthogonal strategy for the controlled loading of cargo into a protein nanocage

Schoonen, L., Eising, S., van Eldijk, M. B., Bresseleers, J., Van Der Pijl, M., Nolte, R. J. M., Bonger, K. M. & van Hest, J. C. M., 18 Apr 2018, In : Bioconjugate Chemistry. 29, 4, p. 1186-1193 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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4 Citations (Scopus)
73 Downloads (Pure)

Modular termination verification of single-threaded and multithreaded programs

Jacobs, B., Bosnacki, D. & Kuiper, R., 1 Aug 2018, In : ACM Transactions on Programming Languages and Systems. 40, 3, A12.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)

Modulation of macrophage phenotype and protein secretion via heparin-IL-4 functionalized supramolecular elastomers

Bonito, V., Smits, A. I. P. M., Goor, O. J. G. M., Ippel, B. D., Driessen-Mol, A., Münker, T. J. A. G., Bosman, A. W., Mes, T., Dankers, P. Y. W. & Bouten, C. V. C., 15 Apr 2018, In : Acta Biomaterialia. 71, p. 247-260 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

13 Citations (Scopus)
2 Downloads (Pure)

Modulators of 14-3-3 protein-protein interactions

Stevers, L. M., Sijbesma, E., Botta, M., Mackintosh, C., Obsil, T., Landrieu, I., Cau, Y., Wilson, A. J., Karawajczyk, A., Eickhoff, J., Davis, J., Hann, M., O'Mahony, G., Doveston, R. G., Brunsveld, L. & Ottmann, C., 10 May 2018, In : Journal of Medicinal Chemistry. 61, 9, p. 3755-3778 24 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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44 Citations (Scopus)
64 Downloads (Pure)

Molecular underpinnings of enzalutamide resistance

Prekovic, S., van den Broeck, T., Linder, S., van Royen, M. E., Houtsmuller, A. B., Handle, F., Joniau, S., Zwart, W. & Claessens, F., 1 Nov 2018, In : Endocrine-related cancer. 25, 11, p. R545-R557 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
6 Citations (Scopus)

Monitoring in het JBZ: ontwerp van efficiëntere en veiligere monitoringprocessen door inzet van (nieuwe) technologie

Nijskens - Derikx, L. C. E. M., 18 Dec 2018, Eindhoven: Technische Universiteit Eindhoven. 70 p.

Research output: ThesisPd Eng Thesis

Mono- and bivalent 14-3-3 inhibitors for characterizing supramolecular “Lysine Wrapping” of oligoethylene glycol (OEG) moieties in proteins

Yilmaz, E., Bier, D., Guillory, X., Briels, J., Ruiz-Blanco, Y. B., Sanchez-Garcia, E., Ottmann, C. & Kaiser, M., 18 Sep 2018, In : Chemistry : A European Journal. 24, 52, p. 13807-13814 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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3 Citations (Scopus)
11 Downloads (Pure)

MRI based 3D finite element modelling to investigate deep tissue injury

Traa, W. A., van Turnhout, M. C., Moerman, K. M., Nelissen, J. L., Nederveen, A. J., Strijkers, G. J., Bader, D. L. & Oomens, C. W. J., 26 Oct 2018, In : Computer Methods in Biomechanics and Biomedical Engineering. 21, 14, p. 760-769 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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2 Citations (Scopus)
36 Downloads (Pure)

MR imaging and elastography of deformation-induced skeletal muscle damage

Nelissen, J. L., 5 Jun 2018, Eindhoven: Technische Universiteit Eindhoven. 133 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

2 Downloads (Pure)

MRI visualization of injectable ureidopyrimidinone hydrogelators by supramolecular contrast agent labeling

Bakker, M. H., Tseng, C. C. S., Keizer, H. M., Seevinck, P. R., Janssen, H. M., van Slochteren, F. J., Chamuleau, S. A. J. & Dankers, P. Y. W., 6 Jun 2018, In : Advanced Healthcare Materials. 7, 11, 8 p., 1701139.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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8 Citations (Scopus)
21 Downloads (Pure)

Multi-modal and multi-vendor retina image registration

Li, Z., Huang, F., Zhang, J., Dashtbozorg, B., Abbasi-Sureshjani, S., Sun, Y., Long, X., Yu, Q., ter Haar Romeny, B. M. & Tan, T., 1 Feb 2018, In : Biomedical Optics Express. 9, 2, p. 410-422 13 p., #306658.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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6 Citations (Scopus)
118 Downloads (Pure)

Multi-omics profiling of the tumor microenvironment: Paving the way to precision immuno-oncology

Finotello, F. & Eduati, F., 5 Oct 2018, In : Frontiers in Oncology. 8, OCT, 9 p., 430.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
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12 Citations (Scopus)
57 Downloads (Pure)

Multiple instance learning: a survey of problem characteristics and applications

Carbonneau, M-A., Cheplygina, V., Granger, E. & Gagnon, G., May 2018, In : Pattern Recognition. 77, p. 329-353 25 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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38 Citations (Scopus)
218 Downloads (Pure)

Multi-wavelength photoacoustic imaging of the atherosclerotic carotid artery: a preclinical feasibility study

Arabul, M. Ü., 7 Dec 2018, Eindhoven: Technische Universiteit Eindhoven. 115 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

Open Access
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21 Downloads (Pure)

Mutually exclusive cellular uptake of combinatorial supramolecular copolymers

van Dun, S., Schill, J., Milroy, L. G. & Brunsveld, L., 2 Nov 2018, In : Chemistry : A European Journal. 24, 61, p. 16445-16451 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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3 Citations (Scopus)
30 Downloads (Pure)

Nanoemulsion-based delivery of fluorescent PARP inhibitors in mouse models of small cell lung cancer

Gonzales, J., Kossatz, S., Roberts, S., Pirovano, G., Brand, C., Pérez-Medina, C., Donabedian, P., de la Cruz, M. J., Mulder, W. J. M. & Reiner, T., 21 Nov 2018, In : Bioconjugate Chemistry. 29, 11, p. 3776-3782 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)
1 Downloads (Pure)

Nanoreactors for green catalysis

De Martino, M. T., Abdelmohsen, L. K. E. A., Rutjes, F. P. J. T., van Hest, J. C. M. & Hessel, V. (Guest ed.), 29 Mar 2018, In : Beilstein Journal of Organic Chemistry. 14, p. 716–733 18 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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17 Citations (Scopus)
105 Downloads (Pure)

Nanoscale interparticle distance within dimers in solution measured by light scattering

van Vliembergen, R. W. L., van Ijzendoorn, L. J. & Prins, M. W. J., 9 Jan 2018, In : Langmuir. 34, 1, p. 179-186 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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3 Citations (Scopus)
155 Downloads (Pure)

Nanoscale mapping functional sites on nanoparticles by points accumulation for imaging in nanoscale topography (PAINT)

Delcanale, P., Miret-Ontiveros, B., Arista-Romero, M., Pujals, S. & Albertazzi, L., 28 Aug 2018, In : ACS Nano. 12, 8, p. 7629-7637 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

15 Citations (Scopus)

Nanostructuring lipophilic dyes in water using stable vesicles, quatsomes, as scaffolds and their use as probes for bioimaging

Ardizzone, A., Kurhuzenkau, S., Illa-Tuset, S., Faraudo, J., Bondar, M., Hagan, D., Van Stryland, E. W., Painelli, A., Sissa, C., Feiner, N., Albertazzi, L., Veciana, J. & Ventosa, N., 19 Apr 2018, In : Small. 14, 16, 6 p., 1703851.

Research output: Contribution to journalArticleAcademicpeer-review

8 Citations (Scopus)

Neu3CA-RT: a framework for real-time fMRI analysis

Heunis, S., Besseling, R., Lamerichs, R., de Louw, A., Breeuwer, M., Aldenkamp, B. & Bergmans, J., 30 Dec 2018, In : Psychiatry Research. Neuroimaging. 282, p. 90-102 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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35 Downloads (Pure)

New insights into the effects of biomaterial chemistry and topography on the morphology of kidney epithelial cells

Hulshof, F., Schophuizen, C., Mihajlovic, M., van Blitterswijk, C., Masereeuw, R., de Boer, J. & Stamatialis, D., 1 Feb 2018, In : Journal of Tissue Engineering and Regenerative Medicine. 12, 2, p. e817-e827

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)

Not-so-supervised: a survey of semi-supervised, multi-instance, and transfer learning in medical image analysis

Cheplygina, V., de Bruijne, M. & Pluim, J. P. W., 17 Apr 2018, In : arXiv. 1804.06353

Research output: Contribution to journalArticleAcademic

Open Access
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302 Downloads (Pure)

Novel in situ gelling hydrogels loaded with recombinant collagen peptide microspheres as a slow-release system induce ectopic bone formation

Fahmy-Garcia, S., Mumcuoglu, D., de Miguel, L., Dieleman, V., Witte-Bouma, J., van der Eerden, B. C. J., van Driel, M., Eglin, D., Verhaar, J. A. N., Kluijtmans, S. G. J. M., van Osch, G. J. V. M. & Farrell, E., 7 Nov 2018, In : Advanced Healthcare Materials. 7, 21, 14 p., 1800507.

Research output: Contribution to journalArticleAcademicpeer-review

Novel polyelectrolyte membranes for fuel and flow batteries: insights from simulations

Sengupta, S., Kritikos, G., Karatasos, K., Venkatnathan, A., Pant, R., Komarov, P. & Lyulin, A. V., 11 Jul 2018, 9th International Conference on Times of Polymers and Composites: From Aerospace to Nanotechnology. American Institute of Physics, 4 p. 020004. (AIP Conference Proceedings; vol. 1981, no. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Citations (Scopus)

Offset-free model predictive control for enhancing MR-HIFU hyperthermia in cancer treatment

Deenen, D. A., Maljaars, E., Sebeke, L., de Jager, B., Heijman, E., Grüll, H. & Heemels, W. P. M. H., 22 Nov 2018, In : IFAC-PapersOnLine. 51, 20, p. 191-196 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Downloads (Pure)

On the interaction between feature selection and parameter determination in fuzzy modelling

Chen, P., Fuchs, C., Wilbik, A., Chan, T. M., van Loon, S., Boer, A. K., Lu, X., Scharnhorst, V. & Kaymak, U., 1 Jan 2018, Information Processing and Management of Uncertainty in Knowledge-Based Systems. Applications - 17th International Conference, IPMU 2018, Proceedings: 17th International Conference, IPMU 2018, Cádiz, Spain, June 11-15, 2018, Proceedings, Part III. Medina, J., Perfilieva, I. & Yager, R. R. (eds.). Dordrecht: Springer, p. 150-161 12 p. (Communications in Computer and Information Science; vol. 855).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

2 Downloads (Pure)

Ontwikkeling van de functie 'expert medische technologie' in het AMC

Siemerink, K. M., 30 Jun 2018, Eindhoven: Technische Universiteit Eindhoven. 56 p.

Research output: ThesisPd Eng Thesis

Optical scattering of rotating dimers for biosensing applications

van Vliembergen, R. W. L., 31 Oct 2018, Eindhoven: Technische Universiteit Eindhoven. 102 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

Open Access
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124 Downloads (Pure)

Optimize transfer learning for lung diseases in bronchoscopy using a new concept: sequential fine-tuning

Tan, T., Li, Z., Liu, H., Ghazvinian Zanjani, F., Ouyang, Q., Tang, Y., Hu, Z. & Li, Q., 16 Aug 2018, In : IEEE Journal of Translational Engineering in Health and Medicine. 6, p. 1800808 8 p., 1800808.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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8 Citations (Scopus)
23 Downloads (Pure)
1 Citation (Scopus)

Outcomes of severe uveitic glaucoma treated with Baerveldt implant: can blindness be prevented?

Tan, A. N., Cornelissen, M. F., Webers, C. A. B., Erckens, R. J., Berendschot, T. T. J. M. & Beckers, H. J. M., 1 Feb 2018, In : Acta Ophthalmologica. 96, 1, p. 24-30 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

7 Citations (Scopus)

Oxytocin levels in the saliva of preterm infant twins during Kangaroo care

Kommers, D., Broeren, M., Oei, G., Feijs, L., Andriessen, P. & Bambang Oetomo, S., 1 Sep 2018, In : Biological Psychology. 137, p. 18-23 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)
1 Downloads (Pure)

Paper-based antibody detection devices using bioluminescent BRET-switching sensor proteins

Tenda, K., van Gerven, B., Arts, R., Hiruta, Y., Merkx, M. & Citterio, D., 19 Nov 2018, In : Angewandte Chemie - International Edition. 57, 47, p. 15369-15373 5 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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18 Citations (Scopus)
69 Downloads (Pure)

PH-induced transformation of biodegradable multilamellar nanovectors for enhanced tumor penetration

Cao, S., Abdelmohsen, L. K. E. A., Shao, J., van den Dikkenberg, J., Mastrobattista, E., Williams, D. S. & van Hest, J. C. M., 20 Nov 2018, In : ACS Macro Letters. 7, 11, p. 1394-1399 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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7 Citations (Scopus)
44 Downloads (Pure)

Photoacoustic and ultrasound imaging of perfusion in skin and skeletal muscle

Heres, H. M., 12 Dec 2018, Eindhoven: Technische Universiteit Eindhoven. 134 p.

Research output: ThesisPhd Thesis 1 (Research TU/e / Graduation TU/e)

Open Access
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484 Downloads (Pure)

Photoacoustic speckle tracking for motion estimation and flow analysis

de Hoop, H., Yoon, H., Kubelick, K. & Emelianov, S., 1 Sep 2018, In : Journal of Biomedical Optics. 23, 9, 9 p., 096001.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
29 Downloads (Pure)

Photoisomerization induced scission of rod-like micelles unravelled with multiscale modeling

Heerdt, G., Tranca, I., Markvoort, A. J., Szyja, B. M., Morgon, N. H. & Hensen, E. J. M., 15 Jan 2018, In : Journal of Colloid and Interface Science. 510, p. 357-367 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
11 Downloads (Pure)

Physical activity and nutrition influences in ageing (PANINI): consortium mission statement

Whittaker, A. C., Delledonne, M., Finni, T., Garagnani, P., Greig, C., Kallen, V., Kokko, K., Lord, J., Maier, A. B., Meskers, C. G. M., Santos, N. C., Sipila, S., Thompson, J. L. & van Riel, N. A. W., 1 Jun 2018, In : Aging Clinical and Experimental Research. 30, 6, p. 685-692 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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6 Citations (Scopus)
38 Downloads (Pure)