Department of Biomedical Engineering

Research Output

Article

A three-dimensional digital image correlation technique for strain measurements in microstructures

Verhulp, E., Rietbergen, van, B. & Huiskes, R., 2004, In : Journal of Biomechanics. 37, 9, p. 1313-1320

Research output: Contribution to journalArticleAcademicpeer-review

224 Citations (Scopus)
2 Downloads (Pure)

A three-dimensional fluid–structure interaction method for heart valve modelling

Loon, van, R., Anderson, P. D., Baaijens, F. P. T. & Vosse, van de, F. N., 2005, In : Comptes Rendus Mecanique. 333, 12, p. 856-866

Research output: Contribution to journalArticleAcademicpeer-review

28 Citations (Scopus)
2 Downloads (Pure)

A time-periodic approach for fluid-structure interaction in distensible vessels

Beulen, B. W. A. M. M., Rutten, M. C. M. & Vosse, van de, F. N., 2009, In : Journal of Fluids and Structures. 25, 5, p. 954-966

Research output: Contribution to journalArticleAcademicpeer-review

15 Citations (Scopus)
1 Downloads (Pure)

A tissue adaptation model based on strain-dependent collagen degradation and contact-guided cell traction

Heck, T. A. M., Wilson, W., Foolen, J., Cilingir, A. C., Ito, K. & Donkelaar, van, C. C., 2015, In : Journal of Biomechanics. 48, 5, p. 823-831 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

14 Citations (Scopus)
7 Downloads (Pure)

Atlas-based mosaicing of left atrial 3-D transesophageal echocardiography images

Mulder, H. W., van Stralen, M., Ren, B., Haak, A., Viergever, M. A., Bosch, J. G. & Pluim, J. P. W., 1 Apr 2017, In : Ultrasound in Medicine and Biology. 43, 4, p. 765-774 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)

Atmospheric plasma needle for biomedical applications

Kieft, I. E., Sladek, R. E. J., van der Laan, E. P. & Stoffels-Adamowicz, E., 2005, In : Polish Journal of Applied Chemistry. 49, 1-2, p. 1-10 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Atmospheric pressure plasma analysis by modulated molecular beam mass spectrometry

Aranda Gonzalvo, Y., Whitmore, T. D., Rees, J. A., Seymour, D. L. & Stoffels - Adamowicz, E., 2006, In : Journal of Vacuum Science and Technology A: Vacuum, Surfaces, and Films. 24, 3, p. 550-553

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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20 Citations (Scopus)
104 Downloads (Pure)

A topology map for novel vesicle-polymer hybrid architectures

Jung, M., Hubert, D. H. W., Bomans, P. H. H., Frederik, P. M., Herk, van, A. M. & German, A. L., 2000, In : Advanced Materials. 12, 3, p. 210-213 3 p.

Research output: Contribution to journalArticleAcademicpeer-review

40 Citations (Scopus)
2 Downloads (Pure)

A transmurally heterogeneous orthotropic activation model for ventricular contraction and its numerical validation

Barbarotta, L., Rossi, S., Dedè, L. & Quarteroni, A., Dec 2018, In : International Journal for Numerical Methods in Biomedical Engineering. 34, 12, 24 p., e3137.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)

A triaxial accelerometer and portable data processing unit for the assessment of daily physical activity

Bouten, C. V. C., Koekkoek, K. T. M., Verduin, M., Kodde, L. & Janssen, J. D., 1997, In : IEEE Transactions on Biomedical Engineering. 44, 3, p. 136-147 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

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640 Citations (Scopus)
1925 Downloads (Pure)

Attenuated cardiac function degradation in ex vivo pig hearts

Kappler, B., van Tuijl, S., Ergin, B., Fixsen, L., Stijnen, M., Ince, C. & de Mol, B. A. J. M., 1 Mar 2020, In : International Journal of Artificial Organs. 43, 3, p. 173-179 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A two-dimensional fluid-structure interaction model of the aortic valve

Hart, de, J., Peters, G. W. M., Schreurs, P. J. G. & Baaijens, F. P. T., 2000, In : Journal of Biomechanics. 33, 9, p. 1079-1088

Research output: Contribution to journalArticleAcademicpeer-review

150 Citations (Scopus)
5 Downloads (Pure)

A two-dimensional model of a normal foot with cartilages and ligaments fir stress analysis

Patil, K. M., Braak, L. H. & Huson, A., 1993, In : Innovation et Technologie en Biologie et Médecine. 14, 2, p. 152-162

Research output: Contribution to journalArticleAcademic

A two-dimensional numerical analysis of unsteady flow in the carotid artery bifurcation.

Vosse, van de, F. N., Steenhoven, van, A. A., Janssen, J. D. & Reneman, R. S., 1990, In : Biorheology. 27, p. 163-189

Research output: Contribution to journalArticleAcademicpeer-review

21 Citations (Scopus)
1 Downloads (Pure)

A two-phase finite element model of the diastolic left ventricle

Huyghe, J. M. R. J., Campen, van, D. H., Arts, M. G. J. & Heethaar, R. M., 1991, In : Journal of Biomechanics. 24, p. 527-538 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

58 Citations (Scopus)
1 Downloads (Pure)

A two-scale approach for propagating cracks in a fluid-saturated porous material

Irzal, F., Remmers, J. J. C., Huyghe, J. M., de Borst, R. & Ito, K., 2010, In : IOP Conference Series: Materials Science and Engineering. 10, 1, 10 p., 012044.

Research output: Contribution to journalArticleAcademicpeer-review

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2 Citations (Scopus)
62 Downloads (Pure)

A-type lamins are essential for TGF-beta1 induced PP2A to dephosphorylate transcription factors

Berlo, van, J. H., Voncken, J. W., Kubben, N., Broers, J. L. V., Duisters, R., Leeuwen, van, R. E. W., Crijns, H. J. G. M., Ramaekers, F. C. S., Hutchison, C. J. & Pinto, Y., 2005, In : Human Molecular Genetics. 14, 19, p. 2839-49

Research output: Contribution to journalArticleAcademicpeer-review

104 Citations (Scopus)
1 Downloads (Pure)

Augmentation in anterior cruciate ligament reconstruction : a histological and biomechanical study on goats

Buma, P., Kok, H. J., Blankevoort, L., Kuijpers, W., Huiskes, R. & Kampen, van, A., 2004, In : International Orthopaedics. 28, 2, p. 91-96

Research output: Contribution to journalArticleAcademicpeer-review

22 Citations (Scopus)

A unified theory for osteonal and hemi-osteonal remodeling

Oers, van, R. F. M., Ruimerman, R., Tanck, E., Hilbers, P. A. J. & Huiskes, R., 2008, In : Bone. 42, 2, p. 250-259

Research output: Contribution to journalArticleAcademicpeer-review

107 Citations (Scopus)

Author's reply to letter to the response on the paper 'Value of biomechanical macromodels as suitable tools for the prevention of work-related low back problems'

Delleman, N., Drost, M. R. & Huson, A., 1994, In : Clinical Biomechanics. 9, 5, p. 326-327 2 p.

Research output: Contribution to journalArticleAcademicpeer-review

Authors response : response to Beaupré and Carter [concerning the article "Why does intermittent hydrostatic pressure enhance the mineralization process in fetal cartilage?]

Tanck, E., Driel, van, W. D., Blankevoort, L., Huiskes, H. W. J., Hagen, J. W. & Burger, E. H., 1999, In : Journal of Biomechanics. 32, 11, p. 1257-

Research output: Contribution to journalArticleAcademicpeer-review

Autologe plaatjes-leukocytengel : toepassing bij diverse chirurgische indicaties

Everts, P. A. M., Everts-Koning, J. G., Scharnhorst, V. & Curvers, J., 2010, In : Bloedtransfusie. 3, 3, p. 87-93

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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Autologous human tissue-engineered heart valves : prospects for systemic applications

Driessen - Mol, A., Rutten, M. C. M., Driessen, N. J. B., Bouten, C. V. C., Zund, G., Baaijens, F. P. T. & Hoerstrup, S. P., 2006, In : Circulation. 114, suppl., p. I-152-I-158

Research output: Contribution to journalArticleAcademicpeer-review

123 Citations (Scopus)
5 Downloads (Pure)

Autologous morsellised bone grafting restores uncontained femoral bone defects in knee arthroplasty: an in vivo study in horses

Loon, van, C. J. M., Waal Malefijt, de, M. C., Buma, P., Stolk, P. W. T., Verdonschot, N. J. J., Tromp, A. M., Huiskes, H. W. J. & Barneveld, A., 2000, In : Journal of Bone & Joint Surgery, British Volume. 82, 3, p. 436-444 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

32 Citations (Scopus)
1 Downloads (Pure)

Automated 3D geometry segmentation of the healthy and diseased carotid artery in free-hand, probe tracked ultrasound images

de Ruijter, J., van Sambeek, M., van de Vosse, F. & Lopata, R., 1 Mar 2020, In : Medical Physics. 47, 3, p. 1034-1047 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

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10 Downloads (Pure)

Automated aortic calcium scoring on low-dose chest computed tomography

Išgum, I., Rutten, A., Prokop, M., Staring, M., Klein, S., Pluim, J. P. W., Viergever, M. A. & Ginneken, van, B., 2010, In : Medical Physics. 37, 2, p. 714-723 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

28 Citations (Scopus)

Automated calibration in vascular x-ray images using the accurate localization of catheter marker bands

Assen, van, H. C., Vrooman, H. A., Egmont-Petersen, M., Bosch, J. G., Koning, G., Linden, van der, E. L., Goedhart, B. & Reiber, J. H. C., 2000, In : Investigative Radiology. 35, 4, p. 219-226 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)

Automated clear cell renal carcinoma grade classification with prognostic significance

Tian, K., Rubadue, C. A., Lin, D. I., Veta, M., Pyle, M. E., Irshad, H. & Heng, Y. J., 1 Jan 2019, In : PLoS ONE. 14, 10, 16 p., e0222641.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
19 Downloads (Pure)

Automated design of programmable enzyme-driven DNA circuits

Roekel, van, H. W. H., Meijer, L. H. H., Masroor, S., Félix Garza, Z. C., Estévez-Torres, A., Rondelez, Y., Zagaris, A., Peletier, M. A., Hilbers, P. A. J. & Greef, de, T. F. A., 2015, In : ACS Synthetic Biology. 4, 6, p. 735-745 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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12 Citations (Scopus)
88 Downloads (Pure)

Automated detection of cerebral microbleeds in patients with Traumatic Brain Injury

van den Heuvel, T. L. A., van der Eerden, A. W., Manniesing, R., Ghafoorian, M., Tan, T., Andriessen, T. M. J. C., vande Vyvere, T., van den Hauwe, L., ter Haar Romeny, B. M., Goraj, B. M. & Platel, B., 1 Jan 2016, In : NeuroImage: Clinical. 12, p. 241-251 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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28 Citations (Scopus)
31 Downloads (Pure)

Automated measurement of brain and white matter lesion volume in type 2 diabetes mellitus

Jongen, C., Grond, van, J., Kappelle, L. J., Biessels, G. J., Viergever, M. A. & Pluim, J. P. W., 2007, In : Diabetologia. 50, 7, p. 1509-1516 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

92 Citations (Scopus)

Automated segmentation of blood-flow regions in large thoracic arteries using 3D-cine PC-MRI measurements

Pelt, van, R. F. P., Nguyen, T. Q. H., Haar Romeny, ter, B. M. & Vilanova, A., 2012, In : International Journal of Computer Assisted Radiology and Surgery. 7, 2, p. 217-224 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

16 Citations (Scopus)

Automatic breath-to-breath analysis of nocturnal polysomnographic recordings

Houdt, van, P. J., Ossenblok, P. P. W., Erp, van, M. G., Schreuder, K. E., Krijn, R. J. J., Boon, P. & Cluitmans, P. J. M., 2011, In : Medical and Biological Engineering and Computing. 49, 7, p. 819-830 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

11 Citations (Scopus)
1 Downloads (Pure)

Automatic classification of focal liver lesions based on MRI and risk factors

Jansen, M. J. A., Kuijf, H. J., Veldhuis, W. B., Wessels, F. J., Viergever, M. A. & Pluim, J. P. W., May 2019, In : PLoS ONE. 14, 5, 13 p., e0217053.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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32 Downloads (Pure)

Automatic contour detection in short-axis cardiac cine MR data

Hautvast, G. L. T. F., Lobregt, S., Breeuwer, M., Vilanova, A. & Gerritsen, F. A., 2005, In : Journal of Cardiovascular Magnetic Resonance. 7, 1, p. 323-324

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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2 Citations (Scopus)
75 Downloads (Pure)

Automatic contour propagation in cine cardiac magnetic resonance images

Hautvast, G. L. T. F., Lobregt, S., Breeuwer, M. & Gerritsen, F. A., 2006, In : IEEE Transactions on Medical Imaging. 25, 11, p. 1472-1482

Research output: Contribution to journalArticleAcademicpeer-review

80 Citations (Scopus)

Automatic corneal nerve fiber segmentation and geometric biomarker quantification

Zhang, D., Huang, F., Khansari, M., Berendschot, T. T. J. M., Xu, X., Dashtbozorg, B., Sun, Y., Zhang, J. & Tan, T., 20 Feb 2020, In : European Physical Journal. Plus. 135, 2, p. 266 16 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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12 Downloads (Pure)

Automatic detection and visualization of qualitative hemodynamic characteristics in cerebral aneurysms

Gasteiger, R., Lehmann, D., Pelt, van, R. F. P., Janiga, G., Beuing, O., Vilanova, A., Theisel, H. & Preim, B., 2012, In : IEEE Transactions on Visualization and Computer Graphics. 18, 12, p. 2178-2187 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

20 Citations (Scopus)
2 Downloads (Pure)

Automatic detection of abnormalities in chest radiographs using local texture analysis

Ginneken, van, B., Katsuragawa, S., Haar Romenij, ter, B. M., Doi, K. & Viergever, M. A., 2002, In : IEEE Transactions on Medical Imaging. 21, 2, p. 139-149

Research output: Contribution to journalArticleAcademicpeer-review

144 Citations (Scopus)

Automatic detection of pulmonary embolism in CTA

Bouma, H., Sonnemans, J. J., Vilanova, A. & Gerritsen, F. A., 2009, In : IEEE Transactions on Medical Imaging. 28, 8, p. 1223-1230

Research output: Contribution to journalArticleAcademicpeer-review

33 Citations (Scopus)

Automatic emphysema detection using weakly labeled HRCT lung images

Pena, I. P., Cheplygina, V., Paschaloudi, S., Vuust, M., Carl, J., Weinreich, U. M., Ostergaard, L. R. & de Bruijne, M., 15 Oct 2018, In : PLoS ONE. 13, 10, 17 p., e0205397.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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36 Downloads (Pure)

Automatic nuclei segmentation in H&E stained breast cancer histopathology images

Veta, M., Diest, van, P. J., Kornegoor, R., Huisman, A., Viergever, M. A. & Pluim, J. P. W., 2013, In : PLoS ONE. 8, 7, 12 p., 70221.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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164 Citations (Scopus)
372 Downloads (Pure)

Automatic segmentation of lung fields in chest radiographs

Ginneken, van, B. & Haar Romenij, ter, B. M., 2000, In : Medical Physics. 27, 10, p. 2445-2455

Research output: Contribution to journalArticleAcademicpeer-review

89 Citations (Scopus)
1 Downloads (Pure)

Automatic segmentation of MR brain images of preterm infants using supervised classification

Moeskops, P., Benders, M. J. N. L., Chiţ, S. M., Kersbergen, K. J., Groenendaal, F., de Vries, L. S., Viergever, M. A. & Išgum, I., Sep 2015, In : Neuroimage. 118, p. 628-41 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

44 Citations (Scopus)

Automatic segmentation of MR brain images with a convolutional neural network

Moeskops, P., Viergever, M. A., Mendrik, A. M., de Vries, L. S., Benders, M. J. N. L. & Išgum, I., 30 Mar 2016, In : IEEE Transactions on Medical Imaging. 35, 5, p. 1252-1261

Research output: Contribution to journalArticleAcademicpeer-review

325 Citations (Scopus)
2 Downloads (Pure)

Automatic segmentation of pulmonary lobes robust against incomplete fissures

Rikxoort, van, E. M., Prokop, M., Hoop, de, B. J., Viergever, M. A., Pluim, J. P. W. & Ginneken, van, B., 2010, In : IEEE Transactions on Medical Imaging. 29, 6, p. 1286-1296

Research output: Contribution to journalArticleAcademicpeer-review

67 Citations (Scopus)
1 Downloads (Pure)

Automatic segmentation of subcutaneous mouse tumors by multiparametric MR analysis based on endogenous contrast

Hectors, S. J. C. G., Jacobs, I., Strijkers, G. J. & Nicolaij, K., 27 Aug 2015, In : Magnetic Resonance Materials in Physics, Biology and Medicine (MAGMA). 28, 4, p. 363-375 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
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1 Citation (Scopus)
100 Downloads (Pure)

Automatic segmentation of the prostate in 3D MR images by atlas matching using localized mutual information

Klein, S., van der Heide, U. A., Lips, I. M., van Vulpen, M., Staring, M. & Pluim, J. P. W., 2008, In : Medical Physics. 35, 4, p. 1407-1417

Research output: Contribution to journalArticleAcademicpeer-review

301 Citations (Scopus)

Automatic tissue segmentation of head and neck MR images for hyperthermia treatment planning

Fortunati, V., Verhaart, R. F., Niessen, W. J., Veenland, J. F., Paulides, M. M. & van Walsum, T., 21 Aug 2015, In : Physics in Medicine and Biology. 60, 16, p. 6547-6562 16 p.

Research output: Contribution to journalArticleAcademicpeer-review

7 Citations (Scopus)

Autoregulation of coronary blood flow in the isolated beating pig heart

Schampaert, S., Veer, van 't, M., Rutten, M. C. M., Tuijl, van, S., Vosse, van de, F. N. & Pijls, N. H. J., 2013, In : Artificial Organs. 37, 8, p. 724-730 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

10 Citations (Scopus)