• Groene Loper, Building 15, Gemini South (room 2.106)

    5612 AZ Eindhoven

    Netherlands

Organization profile

Introduction / mission

We aim to improve our qualitative and quantitative knowledge of biomedical processes and structures and diseases.

Highlighted phrase

Simulations, modeling and informatics

Organisational profile

We want to improve our qualitative and quantitative knowledge of biomedical processes and structures (such as biomembranes, protein interactions and complex biochemical networks) and diseases (such as metabolic syndrome and diabetes). In our research group we distinguish five research topics: molecular simulations, systems biology, synthetic biology, bioinformatics and mathematical modeling.

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 1982 2019

A multilayer microfluidic platform for the conduction of prolonged cell-free gene expression

van der Linden, A., Pieters, P., Yelleswarapu, M., Swank, Z., Huck, W. T. S., Maerkl, S. & de Greef, T., 2019, (Accepted/In press) In : Journal of Visualized Experiments (JoVE).

Research output: Contribution to journalArticleAcademicpeer-review

File

Counterion dependent mechanisms of DNA origami nanostructure stabilization revealed by atomistic molecular simulation

Roodhuizen, J., Hendrikx, P. J. T. M., Hilbers, P. A. J., de Greef, T. & Markvoort, B., 2019, (Accepted/In press) In : ACS Nano.

Research output: Contribution to journalArticleAcademicpeer-review

DNA-based communication in populations of synthetic protocells

Joesaar, A. H., Yang, S., Bögels, B. W. A., van der Linden, A. J., Pieters, P. A., Kumar, P., Dachau, N., Phillips, A., Mann, S. & de Greef, T. F. A., 2019, (Accepted/In press) In : Nature Nanotechnology.

Research output: Contribution to journalArticleAcademicpeer-review

Prizes

AMC Principal Investigator

Natal van Riel (Recipient), 1 May 2016

Recognition: OtherCareer, activity or publication related prizes (lifetime, best paper, poster etc.)Scientific

Best poster award

Yvonne Rozendaal (Recipient), 28 Oct 2016

Recognition: OtherCareer, activity or publication related prizes (lifetime, best paper, poster etc.)Scientific

Heart Neoplasms
Practice Guidelines
Chronic Disease
Stroke
Myocardial Infarction

Activities 1999 2018

Systems Medicine of Metabolic Syndrome; metabolic benefits of bariatric surgery

Natal van Riel (Speaker)
2 Mar 2018

Activity: Talk or presentation typesInvited talkScientific

4th Dutch Bioinformatics & Systems Biology Conference

Natal van Riel (Organiser)
15 May 201816 May 2018

Activity: Participating in or organising an event typesConferenceScientific

Personalized modelling of bile acid metabolism: predicting metabolic effects of bariatric surgery

Natal van Riel (Speaker)
6 Jul 2018

Activity: Talk or presentation typesInvited talkScientific

Press / Media

Miniature testing of drug pairs on tumour biopsies

Federica Eduati

25/06/18

1 item of media coverage

Press/Media: Expert Comment

Miniature Testing of Drug Pairs on Tumour Biopsies

Federica Eduati

25/06/18

1 item of media coverage

Press/Media: Expert Comment

Research areas

Cancer Systems Biology

Rina van Dijck - Postma (Content manager), Amy Broeders (Content manager), Lieke van Gorp (Content manager)

Impact: Research Topic/Theme (at group level)

Synthetic Biology

Rina van Dijck - Postma (Content manager), Amy Broeders (Content manager), Lieke van Gorp (Content manager)

Impact: Research Topic/Theme (at group level)

Systems Biology

Rina van Dijck - Postma (Content manager), Amy Broeders (Content manager), Lieke van Gorp (Content manager)

Impact: Research Topic/Theme (at group level)

Student theses

A computational biology framework: a data analysis tool to support biomedical engineers in their research

Author: Beishuizen, T., 29 Nov 2018

Supervisor: Bosnacki, D. (Supervisor 1), Cheplygina, V. (Supervisor 2), Hilbers, P. (Supervisor 2), Fletcher, G. (Supervisor 2) & Vanschoren, J. (Supervisor 2)

Student thesis: Master

A physiology based glucose-insulin-GLP-1 model: explaining changes observed after Roux-en-Y gastric bypass

Author: Thijssen, L., 30 Aug 2018

Supervisor: Sips, F. (Supervisor 1), Yildirim, V. (Supervisor 2), van Riel, N. (Supervisor 2) & Hilbers, P. (Supervisor 2)

Student thesis: Master

Biomarkers as predictor of quality of life in bariatric patients

Author: Schouten, J., 31 Jan 2019

Supervisor: Hilbers, P. (Supervisor 1), van Riel, N. (Supervisor 2), Scharnhorst, V. (Supervisor 2), van Loon, S. (Supervisor 2) & Deneer, R. (Supervisor 2)

Student thesis: Master