Student theses
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Retinal vascular tree segmentation and classification by means of multiscale vessel filtering and fractal analysis
Philipsen, R. H. H. M. (Author), Berendschot, T. T. J. M. (Supervisor 1), 31 May 2012Student thesis: Master
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Revealing a cooperativity square paradigm for PPARγ: a thermodynamic framework for quantifying PPARγ modulation
Koops, A. (Author), de Vink, P. (Supervisor 1) & Brunsveld, L. (Supervisor 2), 29 Aug 2019Student thesis: Master
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RoboSculpt bone milling in a cochlear implant surgery: investigating the effect of varying irrigation, depth of cut, feed rate, spindle speed, lead angle, and tilt angle on temperature increase, average force, yank, and bone removal rate
Fleuren, L. M. (Author), van Rietbergen, B. (Supervisor 1), Smits, A. I. P. M. (Supervisor 2) & Foolen, J. (Supervisor 2), 28 Feb 2022Student thesis: Master
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RuBisCO functionalised coacervates as carboxysome mimics
Rutjens, N. G. R. (Author), Altenburg, W. (Supervisor 1) & van Hest, J. C. M. (Supervisor 2), 22 Feb 2021Student thesis: Master
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SAMFET fabrication with naphthalenediimide derivatives
Mangione, G. G. G. (Author), Rösch, A. (Supervisor 1), Meijer, E. W. (Supervisor 2) & Palmans, A. R. A. (Supervisor 2), 26 Aug 2020Student thesis: Master
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Scaffold-constrained molecular design using graph-based generative models: Towards improving the abilities of graph-based generative models
Reksoprodjo, M. (Author), Menkovski, V. (Supervisor 1), Grisoni, F. (Supervisor 2) & van Tilborg, D. (Supervisor 2), 20 Mar 2024Student thesis: Master
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Scaffold-free 3D in vitro engineered bone-like construct formation
Pappers, C. E. M. (Author), Hofmann, S. (Supervisor 1) & Vis, M. A. M. (Supervisor 2), 21 Apr 2022Student thesis: Master
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Scaling effects in effective mechanical properties of skin during indentation
van den Boogaert, L. (Author), Oomens, C. W. J. (Supervisor 1), van Turnhout, M. C. (Supervisor 2), Bovendeerd, P. H. M. (Supervisor 2) & van Rietbergen, B. (Supervisor 2), 26 Mar 2020Student thesis: Master
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Scavenging of reactive species by antioxidants: how to assess antioxidant activity
Balk, J. M. (Author), Smits, J. (External coach), Haenen, G. R. M. M. (External coach), Bast, A. (External coach) & Nicolaij, K. (Supervisor 1), 31 May 2007Student thesis: Master
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Scoring co-morbidity severity in bariatric patients based on biomarkers: a data mining approach
Deneer, R. (Author), van Riel, N. A. W. (Supervisor 1), van Loon, S. L. M. (Supervisor 2), Boer, A. (Supervisor 2) & Hilbers, P. A. J. (Supervisor 2), 31 Aug 2017Student thesis: Master
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Screening apolipoprotein A-I lipid nanoparticle platform for various RNA molecules
Trines, M. M. (Author), Kluza, E. (Supervisor 1), Hofstraat, S. R. J. (Supervisor 2) & Mulder, W. J. M. (Supervisor 2), 25 May 2023Student thesis: Master
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Screening peptide-functionalized ureido-pyrimidinone assemblies for cell binding affinity using flow cytometry
Aantjes, P. T. (Author), Veenbrink, V. A. (Supervisor 1) & Dankers, P. Y. W. (Supervisor 2), 29 Aug 2024Student thesis: Master
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SDF-1β chemokine nanocarriers to stimulate vascular growth in kidney organoids
van den Boom, A. M. (Author), Yewdall, N. A. (Supervisor 1) & Hest, van, J. C. M. (Supervisor 2), 27 Aug 2020Student thesis: Master
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Searching for small stabilizers for the interaction between CFTR and 14-3-3 protein
Gielkens, F. (Author), Stevers, L. M. (Supervisor 1) & Brunsveld, L. (Supervisor 2), 21 Jun 2018Student thesis: Master
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Second generation protein-based fluorescent Zn(II) sensors
van Duijnhoven, S. M. J. (Author), Vinkenborg, J. L. (Supervisor 1), Merkx, M. (Supervisor 2), Meijer, E. W. (Supervisor 2), Broers, J. L. V. (Supervisor 2) & Pieterse, K. (Supervisor 2), 29 Feb 2008Student thesis: Master
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Segmentation and classification of skin cancer in histopathological whole slide images
van Zon, M. C. M. (Author), Pluim, J. P. W. (Supervisor 1), Veta, M. (Supervisor 2), Eduati, F. (Supervisor 2), van Diest, P. J. (External coach) & Stathonikos, N. (External coach), 28 Nov 2019Student thesis: Master
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Segmentation and registration methods of the rat brain pharmacological MRI
Kalimeri, M. (Author), ter Haar Romenij, B. M. (Supervisor 1), Nicolaij, K. (Supervisor 2), Heijman, E. (Supervisor 2) & Platel, B. (Supervisor 2), 30 Apr 2009Student thesis: Master
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Segmentation and strain estimation of atherosclerotic plaques using 2D ultrasound
Klein, E. P. (Author), Brands, P. J. (Supervisor 1), Lopata, R. G. P. (Supervisor 2) & van de Vosse, F. N. (Supervisor 2), 31 Aug 2012Student thesis: Master
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Segmentation of the facial nerve in the temporal bone in multi-slice CT images: a semi-automatic approach with a parametric deformable model
Bloembergen, P. C. (Author), Pluim, J. P. W. (Supervisor 1), Breeuwer, M. (Supervisor 2), Lopata, R. G. P. (Supervisor 2) & Bos, J. (Supervisor 2), 31 Aug 2015Student thesis: Master
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Segmentation techniques for the visible mouse
Panday, V. (Author), ter Haar Romenij, B. M. (Supervisor 1), van den Bosch, P. P. J. (Supervisor 2) & Strijkers, G. J. (Supervisor 2), 30 Jun 2003Student thesis: Master
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Selectivity in protein-protein interaction modulation by means of multicolor fluorescence polarization
van Lil, N. M. C. (Author), de Vink, P. J. (Supervisor 1) & Brunsveld, L. (Supervisor 2), 11 Oct 2021Student thesis: Master
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Self-agglomerated collagen patterns: an in vitro model to study the effect of composition and topography on scleraxis expression in tenocytes
van de Pavert, L. L. (Author), Foolen, J. (Supervisor 1), Gelderblom, H. (Supervisor 2), Kurniawan, N. A. (Supervisor 2), Conte, V. (Supervisor 2) & Mansoor, A. (Supervisor 2), 25 Aug 2022Student thesis: Master
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Self-assembly of supramolecular block copolymers
van Loon, A. H. M. (Author), Meijer, E. W. (Supervisor 1) & Pitet, L. M. (External coach), 24 Jun 2020Student thesis: Master
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Semi-synthesis and evaluation of post-translational modified ERalpha and coactivator-mimicking miniproteins
van Dijk, J. W. A. (Author), Brunsveld, L. (Supervisor 1), 30 Apr 2010Student thesis: Master
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Sensitivity analysis of a microvascular exchange model
de Schipper, P. J. (Author), Bovendeerd, P. H. M. (Supervisor 1) & Rosalina, T. T. (Supervisor 2), 25 Oct 2018Student thesis: Master
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Setting up a cofactor interaction assay to study the influence of estrogen receptor charge clamp mutations on cofactor binding
Balk, J. M. M. (Author), Tharun, I. M. (Supervisor 1), de Vries - van Leeuwen, I. J. (Supervisor 2) & Brunsveld, L. (Supervisor 2), 31 Aug 2013Student thesis: Master
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Should a sternum fracture be considered as life-saving or life-threatening?: a numerical feasibility study about blunt trauma aorta rupture
van Walbeek, E. (Author), Brink, P. R. G. (Supervisor 1), van de Vosse, F. N. (Supervisor 2), Wismans, J. (Supervisor 2) & van Rooij, L. (Supervisor 2), 31 Oct 2007Student thesis: Master
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Signaling protein assembly along a Supramolecular wire
Bahida, K. (Author), Magdalena Estirado, E. (Supervisor 1), Brunsveld, L. (Supervisor 2), Ottmann, C. (Supervisor 2) & Merkx, M. (Supervisor 2), 19 Apr 2021Student thesis: Master
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Simulating a patient on veno-arterial extra corporeal membrane oxygenation using a mock circulation loop: validated by clinical data
Habets, F. F. A. M. (Author), van de Vosse, F. N. (Supervisor 1), Rutten, M. C. M. (Supervisor 2), Sels, J. W. (External coach), van Rietbergen, B. (Supervisor 2) & Huberts, W. (Supervisor 2), 24 Sept 2020Student thesis: Master
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Simulating local strains in the lungs induced by mechanical ventilation using a mathematical model
de Winter, M. A. (Author), van de Vosse, F. N. (Supervisor 1), Huberts, W. (Supervisor 2), Quicken, J. A. C. (Supervisor 2), Schwab, H.-M. (Supervisor 2) & Strauch, U. (External coach), 13 Dec 2021Student thesis: Master
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Simulating propulsion of micromotors with a dynamic distribution of catalytic activity
Engelbert van Bevervoorde, M. J. S. (Author), van der Hofstad, R. W. (Supervisor 1) & van Hest, J. C. M. (Supervisor 2), Jul 2023Student thesis: Bachelor
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Simulating the cardiovascular fetal-to-neonatal transition in healthy and pathological conditions
Munneke, A. G. (Author), Delhaas, T. (Supervisor 1), van de Vosse, F. (Supervisor 2) & van Rietbergen, B. (Supervisor 2), 29 Aug 2019Student thesis: Master
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Simulation of balanced steady-state free precession MRI sequences
Coolen, B. F. (Author), Heijman, E. (Supervisor 1), Strijkers, G. J. (Supervisor 2) & Nicolaij, K. (Supervisor 2), 28 Feb 2007Student thesis: Master
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Simultaneous Multi-Slice accelerated 4D-MRI for the Unity MR-linac
Keijnemans, K. (Author), Raaijmakers, A. J. E. (Supervisor 1), Fast, M. F. (External coach), Borman, P. T. S. (External coach), van Eijnatten, M. (Supervisor 2) & Lopata, R. G. P. (Supervisor 2), 19 Apr 2021Student thesis: Master
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Simultaneous-shear-and-compression in a microfluidic device to enhance the osteogenic capacity of osteoblasts
Reitsma, N. F. (Author), Hofmann, S. (Supervisor 1), Vis, M. A. M. (Supervisor 2) & Wentzel, A. (Supervisor 2), 29 Aug 2024Student thesis: Master
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Single-molecule microscopy to quantify the chemical interface of nanoparticles
Pontier, M. H. (Author), Albertazzi, L. (Supervisor 1) & Zijlstra, P. (Supervisor 2), Nov 2020Student thesis: Master
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Single Molecule Spectroscopy To Characterize DNA Functionalized Nanoparticles
van Hoof, B. (Author), Zijlstra, P. (Supervisor 1), Albertazzi, L. (Supervisor 2) & Archontakis, E. (Supervisor 2), Jan 2022Student thesis: Master
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Site-directed irreversible covalent chemistry for isoform-specific stabilization of 14-3-3 complexes
Brzoskowski, J. C. R. (Author), Cossar, P. (Supervisor 1) & Wu, Q. (Supervisor 2), 25 Aug 2022Student thesis: Master
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Small-diameter vascular tissue engineering using electrospinning-based polymer scaffolds
van Lith, R. (Author), Snoeckx, L. H. E. H. (Supervisor 1), Baaijens, F. P. T. (Supervisor 2), Rutten, M. C. M. (Supervisor 2), Stekelenburg, M. (Supervisor 2) & Koole, L. H. (Supervisor 2), 31 Aug 2005Student thesis: Master
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Small field dosimetry in a magnetic field
de Jong, E. (Author), Nicolaij, K. (Supervisor 1), Wolthaus, J. W. H. (Supervisor 2), Raaymakers, B. W. (External coach) & ten Eikelder, H. M. M. (Supervisor 2), 30 Jun 2014Student thesis: Master
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Small repeats in the human genome and neurological diseases
van den Berg, I. (Author), Hilbers, P. A. J. (Supervisor 1), ter Haar Romenij, B. M. (Supervisor 2), Bosnacki, D. (Supervisor 2) & Ligtenberg, W. P. A. (Supervisor 2), 31 Aug 2006Student thesis: Master
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Soaking of 14-3-3σΔC/cJun crystals as an alternative method for obtaining co-crystallized structures
Zweipfenning, F. P. A. (Author), Lau, R. A. (Supervisor 1), Ballone, A. (Supervisor 2), Ottmann, C. (Supervisor 2) & Brunsveld, L. (Supervisor 2), 2021Student thesis: Master
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Software infrastructure for Retina Check: developing multiple software components for the Retina Check screening project
Peppenster, C. J. G. A. (Author), ter Haar Romenij, B. M. (Supervisor 1), 31 Aug 2015Student thesis: Master
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Solar water splitting using chiral squaraine dyes: an exploration of the chiral-induced spin selectivity effect
Robben, J. (Author), Rösch, A. (Supervisor 1), Palmans, A. R. A. (Supervisor 2), Meijer, E. W. (Supervisor 2) & Meskers, S. C. J. (Supervisor 2), 29 Apr 2020Student thesis: Master
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Spatial and temporal modelling of chemical reaction networks: a comparison of the particle based stochastic simulator Smoldyn and classic reaction diffusion equations
Palm, M. M. (Author), ten Eikelder, H. M. M. (Supervisor 1), Steijaert, M. N. (Supervisor 2) & Hilbers, P. A. J. (Supervisor 2), 30 Jun 2009Student thesis: Master
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Spatiotemporal effects of anesthesia during functional imaging experiments in zebra finches: approaches with BOLD-weighted imaging and MR spectroscopy
van Gurp, M. T. (Author), Nicolaij, K. (Supervisor 1), Ruijssevelt, van, L. (External coach) & Hamaide, J. (External coach), 25 Aug 2016Student thesis: Master
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Spatiotemporal modeling the association of glycolytic enzymes with the mitochondrial membrane in Arabidopsis
van den Eijnde, H. R. M. (Author), Hilbers, P. A. J. (Supervisor 1), van Riel, N. A. W. (Supervisor 2), Jeneson, J. A. L. (Supervisor 2), Ratcliffe, R. G. (External coach), Sweetlove, L. J. (External coach), Fell, D. A. (External coach) & Poolman, M. G. (External coach), 30 Nov 2013Student thesis: Master
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Spectral interrogation of guided-mode-resonance biosensors
Jansen, R. H. M. (Author), Fiore, A. (Supervisor 1), Zijlstra, P. (Supervisor 2) & Cantatore, E. (Supervisor 2), 2022Student thesis: Master
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Spectrally Resolved Single Molecule Plasmon Enhanced Fluorescence
Schellekens, T. (Author), Zijlstra, P. (Supervisor 1) & Nooteboom, S. W. (Supervisor 2), 6 Sept 2021Student thesis: Master
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Spinal cord functional MRI: gradient echo versus spin echo
Bouwman, C. J. C. (Author), Backes, W. H. (Supervisor 1) & Nicolaij, K. (Supervisor 2), 30 Sept 2007Student thesis: Master