Biomedical Engineering

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• (In,Ga)N heterostructures in self-assembled GaN nanowires grown on TiN by molecular beam epitaxy

  Author: Goertz, J. J. W., 2016

  Supervisor: Koenraad, P. M. (Supervisor 1), Geelhaar, L. (External person) (External coach), Bakkers, E. P. A. M. (Supervisor 2), Nijdam, S. (Supervisor 2) & Zijlstra, P. (Supervisor 2)

  Student thesis: Master

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• (Semi)automatic quantification of the internal elastic lamina fenestrae in remodeling arteries

  Author: Groen, H. C., 30 Sept 2005

  Supervisor: ter Haar Romenij, B. M. (Supervisor 1), van Zandvoort, M. (Supervisor 2), De Mey, J. G. R. (External coach) & van de Vosse, F. N. (Supervisor 2)

  Student thesis: Master

• 0D lumped approach to incorporate the dynamic part of the pressure at vessel junctions in a 1D wave propagation model

  Author: van den Boom, T., 18 Jan 2018

  Supervisor: Huberts, W. (Supervisor 1) & van de Vosse, F. (Supervisor 2)

  Student thesis: Master

• 1,4,7-triazacyclononane functionalized BTA: a supramolecular polymer for cooperative catalysis

  Author: Robeerst, C. J., 26 Jun 2019

  Supervisor: Mabesoone, M. (Supervisor 1), Su, L. (Supervisor 2), Meijer, B. (Supervisor 2), Palmans, A. (Supervisor 2) & Schenning, A. (Supervisor 2)

  Student thesis: Master

• 19F MRI : methods and applications for quantitative molecular imaging

  Author: Abdurrachim, D., 31 Oct 2008

  Supervisor: Nicolaij, K. (Supervisor 1), Grüll, H. (Supervisor 2), Merkx, M. (Supervisor 2), Strijkers, G. J. (Supervisor 2), Lamerichs, R. M. J. N. (External coach), Yildirim, M. (External person) (External coach) & Kok, M. B. (Supervisor 2)

  Student thesis: Master

• 2D echocardiography strain inmaging of the supported heart: a first look into the governing parameters of left ventricular function in supported hearts and a pilot study towards a novel cardiovascular echography strain imagining technique

  Author: Petterson, N. J., 31 Oct 2014

  Supervisor: Lopata, R. G. P. (Supervisor 1), Rutten, M. C. M. (Supervisor 2), van de Vosse, F. N. (Supervisor 2) & Oomens, C. W. J. (Supervisor 2)

  Student thesis: Master

• 2D tracking of coronary arteries in X-ray angiograms over time

  Author: Plantinga, B. R., 30 Apr 2012

  Supervisor: Fuster, A. (Supervisor 1), Bouwman, C. J. C. (External coach), Vilanova Bartroli, A. (Supervisor 2) & van Assen, H. C. (Supervisor 2)

  Student thesis: Master

• 31P NMR measurement of ATP synthesis flux in skeletal muscle for assessment of mitochondrial function

  Author: Wong, C. S., 30 Sept 2011

  Supervisor: Prompers, J. J. (Supervisor 1)

  Student thesis: Master

• 3D Camera Monitoring of Rodent Irradiation Geometry for High Precision Shielding

  Author: Slegt, V. J., 29 Sept 2022

  Supervisor: Raaijmakers, A. J. E. (Supervisor 1), Pluim, J. P. W. (Supervisor 2), Schwab, H. (Supervisor 2), Staut, N. (External person) (External coach) & Verhaegen, F. J. W. (External person) (External coach)

  Student thesis: Master

• 3-D geometry assessment of lower extremities using multi-perspective, freehand, 2-D ultrasound for improved decision making in peripheral arterial occlusive disease

  Author: Romme, C. J. A., 25 Aug 2022

  Supervisor: Lopata, R. G. P. (Supervisor 1), van Sambeek, M. R. H. M. (Supervisor 2), Jansen, L. C. (Supervisor 2), Gillissen, M. (Supervisor 2) & de Ruijter, J. (Supervisor 2)

  Student thesis: Master

• 3D human osteoblast - osteoclast in vitro co-culture

  Author: Remmers, S. & Mayer, D., 2019

  Supervisor: Remmers, S. (Supervisor 1), Melke, J. (Supervisor 1), Hofmann, S. (Supervisor 1), Ito, K. (Supervisor 1) & Teuschl, A. (External person) (Supervisor 2)

  Student thesis: Master

• 3D laxity assessment in ACL-patients

  Author: Kruis, N. T., 1 Jan 2016

  Supervisor: Ito, K. (Supervisor 1), van Rietbergen, B. (Supervisor 2), Verdonschot, N. J. J. (External person) (External coach) & Sprengers, A. M. J. (Supervisor 1)

  Student thesis: Master

• 3D medical image segmentation with labeled and unlabeled data using autoencoders

  Author: Sital, C. K., 28 Nov 2019

  Supervisor: Raaijmakers, A. (Supervisor 1), Weese, J. (External person) (External coach) & Brosch, T. (External person) (External coach)

  Student thesis: Master

• 3D multimodal visualization techniques for tumor resection planning in neurosurgery

  Author: Brecheisen, R., 31 Jan 2008

  Supervisor: Vilanova Bartroli, A. (Supervisor 1) & Platel, B. (Supervisor 2)

  Student thesis: Master

• 3D orientation scores applied to MRA vessel analysis

  Author: Janssen, M. H. J., 31 Aug 2014

  Supervisor: Breeuwer, M. (Supervisor 1) & Duits, R. (Supervisor 2)

  Student thesis: Master

• 3D quantification of lumbar spinal dynamics at the time of surgery

  Author: Vugts, C. A. J. M., 31 Dec 2008

  Supervisor: Ito, K. (Supervisor 1)

  Student thesis: Master

• 3D reconstruction of coronary artery centerlines from two 2D angiography-based planar projections

  Author: Berendsen, A. J., 11 Oct 2021

  Supervisor: van de Vosse, F. N. (Supervisor 1), van 't Veer, M. (Supervisor 2), van Rietbergen, B. (Supervisor 2) & Bakker, L. M. M. L. (Supervisor 2)

  Student thesis: Master

• A 3D co-culture model of mesenchymal stem cells and endothelial cells to promote vascularization and osteogenesis in bone tissue engineering

  Author: Cramer, E., 29 Nov 2018

  Supervisor: Melke, J. (Supervisor 1) & Hofmann, S. (Supervisor 2)

  Student thesis: Master

• ABCB1 variants in association with clopidogrel response

  Author: de Kock, R. P. P. A., 29 Sept 2016

  Supervisor: Brunsveld, L. (Supervisor 1), Hilbers, P. A. J. (Supervisor 2), Scharnhorst, V. (Supervisor 2) & Deiman, B. (External coach)

  Student thesis: Master

• Abdominal aortic aneurysms : a numerical/experimental approach

  Author: Tummers, S. E. J. M., 30 Sept 2002

  Supervisor: Baaijens, F. P. T. (Supervisor 1), Peters, G. W. M. (Supervisor 2), Rutten, M. (Supervisor 2), van de Vosse, F. (Supervisor 2) & Schurink, G. W. H. (Supervisor 2)

  Student thesis: Master

• A biomechanical view on atrial fibrillation: feasibility of stretch-activated ectopic beats in the left atrium

  Author: Meiburg, R., 30 Apr 2016

  Supervisor: Bovendeerd, P. H. M. (Supervisor 1), Dekker, L. R. C. (Supervisor 2), Oomens, C. W. J. (Supervisor 2) & van de Vosse, F. N. (Supervisor 2)

  Student thesis: Master

• A brain chip to investigate neurite outgrowth by trapping cell-laden hydrogel beads in microsieves

  Author: Labeur, T., 29 Aug 2019

  Supervisor: Bouten, C. (Supervisor 1), Luttge, R. (Supervisor 2), Kurniawan, N. (Supervisor 2) & Bastiaens, A. (Supervisor 2)

  Student thesis: Master

• A cardiac finite element model of the left ventricular mechanics: from canine towards human model

  Author: van Hoeven, M., 30 Sept 2013

  Supervisor: Bovendeerd, P. H. M. (Supervisor 1)

  Student thesis: Master

• Acceleration of phase-contrast (PC) cine-MRI by compressed sensing (CS)

  Author: Dong, H., 31 Aug 2014

  Supervisor: Mohamed, A. G. A. (Supervisor 1), Strijkers, G. J. (Supervisor 2), Coolen, B. F. (External coach), Nicolaij, K. (Supervisor 2) & Florack, L. M. J. (Supervisor 2)

  Student thesis: Master

• Accuracy assessment of inter-fraction dose accumulation using non-rigid deformation models

  Author: Fekkes, S., 31 Aug 2008

  Supervisor: van Elmpt, W. J. C. (Supervisor 1) & Hilbers, P. A. J. (Supervisor 2)

  Student thesis: Master

• ACL-graft mechanical properties as an initiator for the premature development of osteoarthritis in patients after receiving ACL reconstructive surgery

  Author: Boef, M., 22 Feb 2021

  Supervisor: Foolen, J. (Supervisor 1) & Loerakker, S. (Supervisor 2)

  Student thesis: Master

• A Coarse-Grained Molecular Modelling Method for Studying Viruses

  Author: de Waard, T., 31 Oct 2022

  Supervisor: Hilbers, P. A. J. (Supervisor 1) & Markvoort, A. J. (Supervisor 2)

  Student thesis: Master

• A compressible biphasic mixture theory with a fluid content dependent stiffness

  Author: Cornelissen, L. H., 30 Jun 2004

  Supervisor: Baaijens, F. P. T. (Supervisor 1), Oomens, C. W. J. (Supervisor 2), Huyghe, J. M. R. J. (Supervisor 2), Bovendeerd, P. H. M. (Supervisor 2) & van Donkelaar, C. C. (Supervisor 2)

  Student thesis: Master

• A computational biology framework: a data analysis tool to support biomedical engineers in their research

  Author: Beishuizen, T. P. A., 29 Nov 2018

  Supervisor: Bosnacki, D. (Supervisor 1), Cheplygina, V. (Supervisor 2), Hilbers, P. A. J. (Supervisor 2), Fletcher, G. (Supervisor 2) & Vanschoren, J. (Supervisor 2)

  Student thesis: Master

• A computational model for the drug treatment effects for the EGF pathway

  Author: van Tienhoven, S., 31 Jan 2013

  Supervisor: van Riel, N. A. W. (Supervisor 1) & Hilbers, P. A. J. (Supervisor 2)

  Student thesis: Master

• A computational model of the human growth plate

  Author: Brouwers, J. E. M., 30 Sept 2004

  Supervisor: Huiskes, H. W. J. (Supervisor 1), van Donkelaar, C. C. (Supervisor 2) & Sengers, B. G. (Supervisor 2)

  Student thesis: Master

• A constitutive material model to describe the mechanical behavior of human skin in shear, tensile and indentation tests

  Author: Rooijakkers, T. C. E. M., 31 Aug 2017

  Supervisor: Oomens, C. W. J. (Supervisor 1), Loerakker, S. (Supervisor 2), Lopata, R. G. P. (Supervisor 2) & Soetens, J. F. J. (Supervisor 2)

  Student thesis: Master

• Active microfluidic mixing using integrated actuators

  Author: Bos, F. M., 31 May 2007

  Supervisor: den Toonder, J. M. J. (Supervisor 1), Anderson, P. D. (Supervisor 2) & van de Vosse, F. N. (Supervisor 2)

  Student thesis: Master

• Added value of independent component analysis to identify epileptic networks

  Author: Klooster, D. C. W., 31 Oct 2014

  Supervisor: Hilbers, P. A. J. (Supervisor 1), van Riel, N. A. W. (Supervisor 2), Ossenblok, P. P. W. (External coach) & ten Eikelder, H. M. M. (External coach)

  Student thesis: Master

• A decellularized and sterilized human meniscus allograft: towards off-the-shelf meniscus replacement

  Author: Velthuijs, W. A. K., 25 Aug 2022

  Supervisor: Foolen, J. (Supervisor 1) & Spierings, J. M. H. (Supervisor 2)

  Student thesis: Master

• A deeper understanding of RDS and the LISA-procedure: signal analysis and modelling approach

  Author: Geurten, L., 28 Feb 2019

  Supervisor: Bovendeerd, P. (Supervisor 1), Andriessen, P. (External coach) & van Pul, C. (External coach)

  Student thesis: Master

• A desymmetrized bipyridine-based discotic as a precursor for functionalized polymers

  Author: van Zweeden, A. C., 31 Mar 2012

  Supervisor: van Houtem, M. H. C. J. (Supervisor 1) & Vekemans, J. A. J. M. (Supervisor 2)

  Student thesis: Master

• A diffuse-interface model of a red blood cell in flow

  Author: Jaensson, N. O., 30 Apr 2012

  Supervisor: van de Vosse, F. N. (Supervisor 1), Anderson, P. D. (Supervisor 2) & Hilbers, P. A. J. (Supervisor 2)

  Student thesis: Master

• A droplet-based platform for assessing NK cell mediated cytotoxicity in real time

  Author: Houben, L., 19 Apr 2021

  Supervisor: Subedi, N. (Supervisor 1), Conte, V. (Supervisor 2), Merkx, M. (Supervisor 2) & Smits, A. I. P. M. (Supervisor 2)

  Student thesis: Master

• Advancing 4D ultrasound based mechanical characterization of abdominal aortic aneurysms

  Author: van Oorschot, M., 14 Jun 2021

  Supervisor: Lopata, R. G. P. (Supervisor 1), van de Vosse, F. N. (Supervisor 2), Loerakker, S. (Supervisor 2), van Sambeek, M. R. H. M. (Supervisor 2) & Maas, E. J. (Supervisor 2)

  Student thesis: Master

• A feasibility study to reconstruct the optic radiation for epilepsy surgery using fMRI-seeded DTI tractography

  Author: Jacobs, C., 31 Oct 2010

  Supervisor: Brecheisen, R. (Supervisor 1), Platel, B. (Supervisor 2), Vilanova Bartroli, A. (Supervisor 2) & Ossenblok, P. P. W. (Supervisor 2)

  Student thesis: Master

• A finite element model of biventricular cardiac mechanics

  Author: Flores de la Parra, A., 31 Aug 2012

  Supervisor: Bovendeerd, P. H. M. (Supervisor 1), van de Vosse, F. N. (Supervisor 2), Oomens, C. W. J. (Supervisor 2), Delhaas, T. (Supervisor 2) & Pluijmert, M. H. (Supervisor 2)

  Student thesis: Master

• A Finite Element Model of Ischemic Heart Disease

  Author: Kraamer, M., 13 Sept 2021

  Supervisor: Bovendeerd, P. H. M. (Supervisor 1) & Janssens, K. L. P. M. (Supervisor 2)

  Student thesis: Master

• A Finite Element Model of the Left Ventricle using LS-DYNA

  Author: Kwakman, S. M. B., 15 Dec 2022

  Supervisor: van de Vosse, F. N. (Supervisor 1), Quicken, J. A. C. (Supervisor 2) & Hoeijmakers, M. J. M. M. (Supervisor 2)

  Student thesis: Master

• A framework towards the computation of the Fractional Flow Reserve from coronary Optical Coherence Tomography images

  Author: Vermeer, A. J. E., 27 Jan 2022

  Supervisor: van de Vosse, F. N. (Supervisor 1) & van 't Veer, M. (Supervisor 2)

  Student thesis: Master

• A Functionalized Anatomical Model for Transcutaneous Electrical Stimulation of the Spinal Cord to Improve Upper Extremity Motor Function

  Author: de Graaf, M. A. F. A., 13 Sept 2021

  Supervisor: Raaijmakers, A. J. E. (Supervisor 1), Pluim, J. P. W. (Supervisor 2), Lopata, R. G. P. (Supervisor 2) & Paoles, E. (External coach)

  Student thesis: Master

• A general framework for straightforward model construction of multi-component thermodynamic equilibrium systems

  Author: Geertjens, N. H. J., 28 Feb 2022

  Supervisor: Wezeman, T. (Supervisor 1) & Brunsveld, L. (Supervisor 2)

  Student thesis: Master

• A human white matter fiber tract atlas created with TrackMark and Validation of fiber tracking algorithms using hardware phantoms

  Author: Pullens, W. L. P. M., 30 Sept 2006

  Supervisor: Goebel, R. (External person) (Supervisor 1), Nicolaij, K. (Supervisor 2), Roebroeck, A. F. (External person) (Supervisor 2) & Vilanova Bartroli, A. (Supervisor 2)

  Student thesis: Master

• Aldosterone synthase inhibitors: a quest for a mechanism-based approach

  Author: Kösters, B. G. M. S., 30 Sept 2006

  Supervisor: Hermans, J. J. R. M. (Supervisor 1) & Smits, J. (Supervisor 2)

  Student thesis: Master

• Altered Global Organization of Structural Covariance Networks Relate to Childhood Absence Epilepsy

  Author: Eussen, M. J. A., 2022

  Supervisor: Breeuwer, M. (Supervisor 1), Drenthen, G. S. (External coach), Bosnacki, D. (Supervisor 2) & Scannell, C. (Supervisor 2)

  Student thesis: Master